Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.88□□□□□ -1.95
SNRNP40Q96DI7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SNRNP40Q96DI7 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.88□□□□□ -1.95
SNRNP40Q96DI7 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.88□□□□□ -1.95
SNRNP40Q96DI7 AC010653.1-201ENST00000571108 881 ntBASIC2.88□□□□□ -1.95
SNRNP40Q96DI7 AL355877.2-201ENST00000603670 358 ntBASIC2.88□□□□□ -1.95
SNRNP40Q96DI7 AC107294.1-201ENST00000609524 467 ntBASIC2.88□□□□□ -1.95
SNRNP40Q96DI7 AC027807.2-201ENST00000616099 408 ntBASIC2.88□□□□□ -1.95
SNRNP40Q96DI7 AC006338.1-201ENST00000618453 749 ntBASIC2.88□□□□□ -1.95
SNRNP40Q96DI7 SNORD39.4-201ENST00000620099 78 ntBASIC2.88□□□□□ -1.95
SNRNP40Q96DI7 AC099506.2-201ENST00000623074 221 ntBASIC2.88□□□□□ -1.95
SNRNP40Q96DI7 AC068057.2-201ENST00000624047 895 ntBASIC2.88□□□□□ -1.95
SNRNP40Q96DI7 AP003399.1-201ENST00000637534 361 ntBASIC2.88□□□□□ -1.95
SNRNP40Q96DI7 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.88□□□□□ -1.95
SNRNP40Q96DI7 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.88□□□□□ -1.95
SNRNP40Q96DI7 API5P2-201ENST00000397055 1498 ntBASIC2.88□□□□□ -1.95
SNRNP40Q96DI7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.88□□□□□ -1.95
SNRNP40Q96DI7 AC017071.1-201ENST00000564407 2204 ntBASIC2.88□□□□□ -1.95
SNRNP40Q96DI7 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.88□□□□□ -1.95
SNRNP40Q96DI7 MTND5P7-201ENST00000413558 1798 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AL035425.3-201ENST00000564206 4996 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 MTND5P29-201ENST00000458676 1807 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 OR1S2-201ENST00000302592 978 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 MIR449A-201ENST00000362113 91 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 RNY4P16-201ENST00000364768 94 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 SNORD21-201ENST00000383953 95 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 RNU6-701P-201ENST00000384059 107 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 MRPL42P2-201ENST00000403169 426 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AL136116.1-201ENST00000403591 381 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 RNU4-72P-201ENST00000410754 173 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AL365203.2-201ENST00000423444 196 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 RAC1P6-201ENST00000423911 575 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 SNRPEP9-201ENST00000436794 238 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AC016696.1-201ENST00000446949 318 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 SNORD97-201ENST00000459187 142 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AP000797.1-201ENST00000478870 387 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 RPF2P2-201ENST00000504693 896 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AC114786.4-201ENST00000508771 728 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 RNU6-759P-201ENST00000516740 103 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AC107934.2-201ENST00000518653 310 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AC011979.2-201ENST00000527568 352 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AC128657.1-201ENST00000549459 145 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 MRPS36P5-201ENST00000551909 298 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 ZNF519P3-201ENST00000557158 1032 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AC005498.1-201ENST00000592125 465 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AC008739.2-201ENST00000597006 317 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 DUXAP4-201ENST00000603046 613 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AL670379.6-201ENST00000603753 252 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AL670379.11-201ENST00000604059 253 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AC008162.1-201ENST00000604718 254 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AL670379.1-201ENST00000604752 252 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AL035413.2-201ENST00000604801 525 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 MTND4LP5-201ENST00000605152 292 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AL670379.5-201ENST00000605253 252 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AL670379.12-201ENST00000605291 253 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AL670379.8-201ENST00000605353 252 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AL670379.7-201ENST00000605823 252 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AC008498.1-201ENST00000613012 531 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 uc_338.12-201ENST00000616344 181 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 UCA1.1-201ENST00000620952 75 ntBASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.87□□□□□ -1.95
SNRNP40Q96DI7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 AC000403.1-201ENST00000613696 3585 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 AC092104.1-201ENST00000497346 1441 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 RNU6-553P-201ENST00000364047 96 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 AF228730.1-201ENST00000397972 663 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 MIR888-201ENST00000401186 77 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 AL031577.2-201ENST00000404133 280 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 RNU6-193P-201ENST00000410977 107 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 RN7SKP284-201ENST00000411002 343 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 AL356968.1-201ENST00000416622 474 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 Z99497.1-201ENST00000421282 135 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 HMGN2P30-201ENST00000423237 256 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 AC022018.1-201ENST00000430685 241 ntBASIC2.86□□□□□ -1.95
SNRNP40Q96DI7 GPM6BP2-201ENST00000432046 144 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms