Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.05□□□□□ -1.92
VPS33AQ96AX1 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.05□□□□□ -1.92
VPS33AQ96AX1 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.05□□□□□ -1.92
VPS33AQ96AX1 MIR4276-201ENST00000584832 70 ntBASIC3.05□□□□□ -1.92
VPS33AQ96AX1 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.05□□□□□ -1.92
VPS33AQ96AX1 AC012065.4-201ENST00000602445 679 ntBASIC3.05□□□□□ -1.92
VPS33AQ96AX1 AL035413.2-201ENST00000604801 525 ntBASIC3.05□□□□□ -1.92
VPS33AQ96AX1 U3.45-201ENST00000607547 219 ntBASIC3.05□□□□□ -1.92
VPS33AQ96AX1 AL157817.1-201ENST00000614264 790 ntBASIC3.05□□□□□ -1.92
VPS33AQ96AX1 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VPS33AQ96AX1 AC007494.3-201ENST00000624660 743 ntBASIC3.05□□□□□ -1.92
VPS33AQ96AX1 AL034408.1-202ENST00000636088 415 ntBASIC3.05□□□□□ -1.92
VPS33AQ96AX1 AL392088.2-201ENST00000637607 285 ntBASIC3.05□□□□□ -1.92
VPS33AQ96AX1 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
VPS33AQ96AX1 AL353743.1-202ENST00000431724 1695 ntBASIC3.04□□□□□ -1.92
VPS33AQ96AX1 CR848007.1-201ENST00000442354 1699 ntBASIC3.04□□□□□ -1.92
VPS33AQ96AX1 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
VPS33AQ96AX1 HSPE1P11-201ENST00000339579 310 ntBASIC3.04□□□□□ -1.92
VPS33AQ96AX1 SNORD21-201ENST00000383953 95 ntBASIC3.04□□□□□ -1.92
VPS33AQ96AX1 SNORA26.7-201ENST00000391288 122 ntBASIC3.04□□□□□ -1.92
VPS33AQ96AX1 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
VPS33AQ96AX1 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS33AQ96AX1 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.04□□□□□ -1.92
VPS33AQ96AX1 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.04□□□□□ -1.92
VPS33AQ96AX1 AL358075.3-201ENST00000426289 226 ntBASIC3.04□□□□□ -1.92
VPS33AQ96AX1 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.04□□□□□ -1.92
VPS33AQ96AX1 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.04□□□□□ -1.92
VPS33AQ96AX1 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.04□□□□□ -1.92
VPS33AQ96AX1 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VPS33AQ96AX1 RPL37P4-201ENST00000448908 268 ntBASIC3.04□□□□□ -1.92
VPS33AQ96AX1 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS33AQ96AX1 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.04□□□□□ -1.92
VPS33AQ96AX1 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.04□□□□□ -1.92
VPS33AQ96AX1 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
VPS33AQ96AX1 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS33AQ96AX1 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.04□□□□□ -1.92
VPS33AQ96AX1 AC007458.1-201ENST00000542812 373 ntBASIC3.04□□□□□ -1.92
VPS33AQ96AX1 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
VPS33AQ96AX1 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS33AQ96AX1 AL355598.1-201ENST00000604169 202 ntBASIC3.04□□□□□ -1.92
VPS33AQ96AX1 AC104763.2-201ENST00000604179 382 ntBASIC3.04□□□□□ -1.92
VPS33AQ96AX1 AC007363.1-201ENST00000604736 620 ntBASIC3.04□□□□□ -1.92
VPS33AQ96AX1 AC012468.1-201ENST00000604888 430 ntBASIC3.04□□□□□ -1.92
VPS33AQ96AX1 MTND4LP5-201ENST00000605152 292 ntBASIC3.04□□□□□ -1.92
VPS33AQ96AX1 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS33AQ96AX1 UCA1.1-201ENST00000620952 75 ntBASIC3.04□□□□□ -1.92
VPS33AQ96AX1 AC007998.5-201ENST00000622938 237 ntBASIC3.04□□□□□ -1.92
VPS33AQ96AX1 AC090617.7-201ENST00000623952 126 ntBASIC3.04□□□□□ -1.92
VPS33AQ96AX1 AC012442.3-202ENST00000636742 206 ntBASIC3.04□□□□□ -1.92
VPS33AQ96AX1 AC099654.13-201ENST00000639774 207 ntBASIC3.04□□□□□ -1.92
VPS33AQ96AX1 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
VPS33AQ96AX1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VPS33AQ96AX1 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
VPS33AQ96AX1 AC110491.1-201ENST00000562191 2010 ntBASIC3.03□□□□□ -1.92
VPS33AQ96AX1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
VPS33AQ96AX1 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
VPS33AQ96AX1 RNU6-778P-201ENST00000363269 103 ntBASIC3.03□□□□□ -1.92
VPS33AQ96AX1 RNU6-960P-201ENST00000364056 120 ntBASIC3.03□□□□□ -1.92
VPS33AQ96AX1 RNU6-512P-201ENST00000364438 103 ntBASIC3.03□□□□□ -1.92
VPS33AQ96AX1 MIR218-2-201ENST00000385006 110 ntBASIC3.03□□□□□ -1.92
VPS33AQ96AX1 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.03□□□□□ -1.92
VPS33AQ96AX1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.03□□□□□ -1.92
VPS33AQ96AX1 RPS15AP5-201ENST00000436276 388 ntBASIC3.03□□□□□ -1.92
VPS33AQ96AX1 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.03□□□□□ -1.92
VPS33AQ96AX1 RPL21P2-201ENST00000440049 481 ntBASIC3.03□□□□□ -1.92
VPS33AQ96AX1 TAF9P1-201ENST00000445421 515 ntBASIC3.03□□□□□ -1.92
VPS33AQ96AX1 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.03□□□□□ -1.92
VPS33AQ96AX1 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.03□□□□□ -1.92
VPS33AQ96AX1 CYCSP35-201ENST00000451978 304 ntBASIC3.03□□□□□ -1.92
VPS33AQ96AX1 TAF9P2-201ENST00000454958 515 ntBASIC3.03□□□□□ -1.92
VPS33AQ96AX1 RPL39P36-201ENST00000490784 156 ntBASIC3.03□□□□□ -1.92
VPS33AQ96AX1 SEM1P1-201ENST00000506694 209 ntBASIC3.03□□□□□ -1.92
VPS33AQ96AX1 AC009901.1-201ENST00000506703 541 ntBASIC3.03□□□□□ -1.92
VPS33AQ96AX1 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.03□□□□□ -1.92
VPS33AQ96AX1 NDUFB4P2-201ENST00000509515 391 ntBASIC3.03□□□□□ -1.92
VPS33AQ96AX1 RNA5SP337-201ENST00000517007 109 ntBASIC3.03□□□□□ -1.92
VPS33AQ96AX1 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.03□□□□□ -1.92
VPS33AQ96AX1 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.03□□□□□ -1.92
VPS33AQ96AX1 NACAP3-201ENST00000552100 481 ntBASIC3.03□□□□□ -1.92
VPS33AQ96AX1 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.03□□□□□ -1.92
VPS33AQ96AX1 RPL21P12-201ENST00000559810 515 ntBASIC3.03□□□□□ -1.92
VPS33AQ96AX1 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.03□□□□□ -1.92
VPS33AQ96AX1 MIR2682-201ENST00000580305 110 ntBASIC3.03□□□□□ -1.92
VPS33AQ96AX1 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.03□□□□□ -1.92
VPS33AQ96AX1 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.03□□□□□ -1.92
VPS33AQ96AX1 AL365204.3-201ENST00000612448 685 ntBASIC3.03□□□□□ -1.92
VPS33AQ96AX1 uc_338.25-201ENST00000613756 156 ntBASIC3.03□□□□□ -1.92
VPS33AQ96AX1 LRRC77P-213ENST00000637727 880 ntBASIC3.03□□□□□ -1.92
VPS33AQ96AX1 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.93
VPS33AQ96AX1 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS33AQ96AX1 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
VPS33AQ96AX1 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VPS33AQ96AX1 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VPS33AQ96AX1 RNU4-1-201ENST00000363925 141 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 RNU1-73P-201ENST00000383971 164 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 MIR490-201ENST00000384865 128 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS33AQ96AX1 RNU6ATAC-201ENST00000408749 126 ntBASIC3.02□□□□□ -1.93
VPS33AQ96AX1 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms