Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AL049838.1-201ENST00000563647 981 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AC068944.2-201ENST00000610373 403 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AC009487.4-201ENST00000624969 3585 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 TEX21P-201ENST00000447107 1476 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 SNORA6-201ENST00000384033 151 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 RNU2-40P-201ENST00000410833 196 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AC114973.1-201ENST00000429057 632 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 RNF2P1-201ENST00000442955 1010 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 RNU7-95P-201ENST00000459222 64 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 SYPL1P1-201ENST00000473622 768 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 OR4P1P-201ENST00000530808 1136 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AC245036.5-201ENST00000596330 847 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 RNU1-139P-201ENST00000391307 165 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 DSTNP4-201ENST00000399472 474 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AC087854.1-201ENST00000519706 414 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AC135178.6-201ENST00000605314 398 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 OR4G11P-202ENST00000642116 1414 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 Y_RNA.48-201ENST00000362710 103 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 MIR216A-201ENST00000385063 110 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 TRIM60P13-201ENST00000432350 1283 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 THAP5P1-201ENST00000439089 262 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 MTCO3P2-201ENST00000457365 171 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 MRPS17P9-201ENST00000511924 393 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 HMGB1P14-201ENST00000557424 591 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AC245884.12-201ENST00000615364 59 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 MTND5P30-201ENST00000452896 1731 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
SYNE1Q8NF91 RNU4-51P-201ENST00000364206 140 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 Y_RNA.274-201ENST00000364714 101 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 MIR627-201ENST00000384979 97 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AL136372.1-201ENST00000403060 228 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AP002345.1-201ENST00000456493 928 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 RNU2-44P-201ENST00000516795 194 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 SCARNA11.3-201ENST00000517276 130 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AC067904.2-201ENST00000517322 1283 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 HMGB1P46-201ENST00000520062 610 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AC107954.1-201ENST00000565906 727 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AC023824.2-201ENST00000566185 400 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AL669831.4-202ENST00000590817 238 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 U73023.1-201ENST00000603134 700 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AC013476.2-201ENST00000614456 459 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 HSPE1P11-201ENST00000339579 310 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 RNU6-619P-201ENST00000365146 108 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 RNU6-244P-201ENST00000391028 104 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AL121578.1-201ENST00000428051 892 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.48□□□□□ -2.33
SYNE1Q8NF91 Z85994.2-201ENST00000434327 452 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 ATG12P2-201ENST00000456830 416 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC0.48□□□□□ -2.33
SYNE1Q8NF91 HMGN1P7-201ENST00000491722 313 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.48□□□□□ -2.33
SYNE1Q8NF91 SNRPGP16-201ENST00000533275 226 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 BNIP3P7-201ENST00000605641 516 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AC098657.3-201ENST00000620434 263 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 RNU4-72P-201ENST00000410754 173 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC0.48□□□□□ -2.33
SYNE1Q8NF91 RPS23P3-201ENST00000470993 430 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AL161670.1-201ENST00000554348 137 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 SDR42E1P2-201ENST00000614861 481 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 VN1R7P-201ENST00000619242 903 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 SDR42E1P4-201ENST00000620894 481 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC0.48□□□□□ -2.33
SYNE1Q8NF91 RPS6P15-201ENST00000431996 751 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 XKRY2-201ENST00000442362 1093 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC0.48□□□□□ -2.33
SYNE1Q8NF91 RNA5SP121-201ENST00000516537 101 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AC083923.1-201ENST00000523708 376 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.48□□□□□ -2.33
SYNE1Q8NF91 LINC00933-203ENST00000559812 219 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms