Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 AC010300.1-201ENST00000600671 5134 ntBASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 AC021146.4-201ENST00000309229 279 ntBASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 RNU6-1115P-201ENST00000362490 106 ntBASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 Y_RNA.126-201ENST00000363382 111 ntBASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 SET-203ENST00000372688 801 ntTSL 2 BASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 E2F6P2-201ENST00000420708 748 ntBASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 AC018865.2-201ENST00000423631 129 ntBASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 AC096644.2-201ENST00000429278 159 ntBASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 RPL7P28-201ENST00000437739 740 ntBASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 Z82210.1-201ENST00000440037 231 ntBASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 AC087884.1-201ENST00000469738 328 ntBASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 RPL7P5-201ENST00000471472 736 ntBASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 AC084198.1-201ENST00000477747 402 ntBASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 KC877373.1-201ENST00000479066 408 ntBASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 AC009901.1-201ENST00000506703 541 ntBASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 AC116337.1-201ENST00000509680 687 ntBASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 SNORA25.10-201ENST00000515926 124 ntBASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 MIR892C-201ENST00000516410 77 ntBASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 MIR3160-1-201ENST00000577972 85 ntBASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 MIR6128-201ENST00000615528 109 ntBASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 RNA5SP439-201ENST00000617595 124 ntBASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 SNORD39.4-201ENST00000620099 78 ntBASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 AC007785.2-201ENST00000598627 1916 ntBASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 EOGT-210ENST00000615922 1931 ntBASIC5.03□□□□□ -1.6
NPAS4Q8IUM7 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NPAS4Q8IUM7 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPAS4Q8IUM7 CDC27P3-201ENST00000635418 1910 ntBASIC5.02□□□□□ -1.61
NPAS4Q8IUM7 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NPAS4Q8IUM7 MIR133A2-201ENST00000347538 102 ntBASIC5.02□□□□□ -1.61
NPAS4Q8IUM7 SDHCP2-201ENST00000398565 501 ntBASIC5.02□□□□□ -1.61
NPAS4Q8IUM7 AL603908.1-201ENST00000406098 201 ntBASIC5.02□□□□□ -1.61
NPAS4Q8IUM7 RNU6-847P-201ENST00000411115 108 ntBASIC5.02□□□□□ -1.61
NPAS4Q8IUM7 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.02□□□□□ -1.61
NPAS4Q8IUM7 RPS24P13-201ENST00000442520 397 ntBASIC5.02□□□□□ -1.61
NPAS4Q8IUM7 RPL21P126-201ENST00000470049 478 ntBASIC5.02□□□□□ -1.61
NPAS4Q8IUM7 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.02□□□□□ -1.61
NPAS4Q8IUM7 AC093227.2-201ENST00000589357 285 ntBASIC5.02□□□□□ -1.61
NPAS4Q8IUM7 RMST_4.1-201ENST00000616886 107 ntBASIC5.02□□□□□ -1.61
NPAS4Q8IUM7 BX005214.3-202ENST00000619809 325 ntBASIC5.02□□□□□ -1.61
NPAS4Q8IUM7 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NPAS4Q8IUM7 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.02□□□□□ -1.61
NPAS4Q8IUM7 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.02□□□□□ -1.61
NPAS4Q8IUM7 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NPAS4Q8IUM7 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
NPAS4Q8IUM7 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
NPAS4Q8IUM7 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 MTND5P30-201ENST00000452896 1731 ntBASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 RNU6-1303P-201ENST00000364841 107 ntBASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 RNU6-1040P-201ENST00000383974 107 ntBASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 AC079809.1-201ENST00000415468 276 ntBASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 SCARNA10-201ENST00000459255 330 ntBASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 RN7SL303P-201ENST00000469773 251 ntBASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 IGLVIV-65-201ENST00000517313 360 ntBASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 AP000827.1-201ENST00000527814 258 ntBASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 MIR3138-201ENST00000585238 82 ntBASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 OR1M4P-201ENST00000589199 287 ntBASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 RNU6-85P-201ENST00000605989 107 ntBASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 NAA50-211ENST00000630058 177 ntTSL 5 BASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 399 ms