Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 MIR5701-2-201ENST00000615634 82 ntBASIC4.4□□□□□ -1.71
ATG4DQ86TL0 SNORD39.4-201ENST00000620099 78 ntBASIC4.4□□□□□ -1.71
ATG4DQ86TL0 CR381572.2-201ENST00000624852 397 ntBASIC4.4□□□□□ -1.71
ATG4DQ86TL0 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ATG4DQ86TL0 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
ATG4DQ86TL0 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ATG4DQ86TL0 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ATG4DQ86TL0 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
ATG4DQ86TL0 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
ATG4DQ86TL0 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
ATG4DQ86TL0 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
ATG4DQ86TL0 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ATG4DQ86TL0 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
ATG4DQ86TL0 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
ATG4DQ86TL0 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ATG4DQ86TL0 MAPK10-349ENST00000641767 3661 ntBASIC4.39□□□□□ -1.71
ATG4DQ86TL0 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.39□□□□□ -1.71
ATG4DQ86TL0 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.39□□□□□ -1.71
ATG4DQ86TL0 Y_RNA.27-201ENST00000362540 103 ntBASIC4.39□□□□□ -1.71
ATG4DQ86TL0 RNVU1-3-201ENST00000364313 161 ntBASIC4.39□□□□□ -1.71
ATG4DQ86TL0 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.39□□□□□ -1.71
ATG4DQ86TL0 SNORA56-201ENST00000383966 129 ntBASIC4.39□□□□□ -1.71
ATG4DQ86TL0 Y_RNA.439-201ENST00000384119 94 ntBASIC4.39□□□□□ -1.71
ATG4DQ86TL0 RNU6-22P-201ENST00000384355 107 ntBASIC4.39□□□□□ -1.71
ATG4DQ86TL0 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
ATG4DQ86TL0 RNU6-700P-201ENST00000391043 107 ntBASIC4.39□□□□□ -1.71
ATG4DQ86TL0 CYB5AP4-201ENST00000396692 399 ntBASIC4.39□□□□□ -1.71
ATG4DQ86TL0 AL590704.1-201ENST00000402856 794 ntBASIC4.39□□□□□ -1.71
ATG4DQ86TL0 AL513475.1-201ENST00000406602 315 ntBASIC4.39□□□□□ -1.71
ATG4DQ86TL0 RNU4-65P-201ENST00000410473 140 ntBASIC4.39□□□□□ -1.71
ATG4DQ86TL0 RPL37P18-201ENST00000411602 243 ntBASIC4.39□□□□□ -1.71
ATG4DQ86TL0 AC017079.2-201ENST00000416102 485 ntBASIC4.39□□□□□ -1.71
ATG4DQ86TL0 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.39□□□□□ -1.71
ATG4DQ86TL0 AL031736.2-201ENST00000426573 787 ntBASIC4.39□□□□□ -1.71
ATG4DQ86TL0 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ATG4DQ86TL0 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.39□□□□□ -1.71
ATG4DQ86TL0 AC006466.1-201ENST00000438721 289 ntBASIC4.39□□□□□ -1.71
ATG4DQ86TL0 AC008264.1-201ENST00000447612 367 ntBASIC4.39□□□□□ -1.71
ATG4DQ86TL0 RPL21P41-201ENST00000459863 264 ntBASIC4.39□□□□□ -1.71
ATG4DQ86TL0 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.39□□□□□ -1.71
ATG4DQ86TL0 MTND3P25-201ENST00000509243 135 ntBASIC4.39□□□□□ -1.71
ATG4DQ86TL0 Y_RNA.662-201ENST00000516028 97 ntBASIC4.39□□□□□ -1.71
ATG4DQ86TL0 RNU6-390P-201ENST00000516259 103 ntBASIC4.39□□□□□ -1.71
ATG4DQ86TL0 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.39□□□□□ -1.71
ATG4DQ86TL0 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.39□□□□□ -1.71
ATG4DQ86TL0 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.39□□□□□ -1.71
ATG4DQ86TL0 HNRNPCP4-201ENST00000571636 900 ntBASIC4.39□□□□□ -1.71
ATG4DQ86TL0 MIR3144-201ENST00000579460 79 ntBASIC4.39□□□□□ -1.71
ATG4DQ86TL0 Z83818.1-201ENST00000603584 150 ntBASIC4.39□□□□□ -1.71
ATG4DQ86TL0 AL121932.1-201ENST00000605542 214 ntBASIC4.39□□□□□ -1.71
ATG4DQ86TL0 MIR8069-1-201ENST00000616627 86 ntBASIC4.39□□□□□ -1.71
ATG4DQ86TL0 MIR8069-2-201ENST00000621412 86 ntBASIC4.39□□□□□ -1.71
ATG4DQ86TL0 LINC02555-201ENST00000563933 1951 ntBASIC4.39□□□□□ -1.71
ATG4DQ86TL0 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
ATG4DQ86TL0 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ATG4DQ86TL0 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.39□□□□□ -1.71
ATG4DQ86TL0 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ATG4DQ86TL0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
ATG4DQ86TL0 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
ATG4DQ86TL0 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
ATG4DQ86TL0 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ATG4DQ86TL0 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
ATG4DQ86TL0 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.38□□□□□ -1.71
ATG4DQ86TL0 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
ATG4DQ86TL0 AL606537.1-201ENST00000607258 2011 ntBASIC4.38□□□□□ -1.71
ATG4DQ86TL0 AC107068.1-201ENST00000563286 4218 ntBASIC4.38□□□□□ -1.71
ATG4DQ86TL0 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATG4DQ86TL0 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
ATG4DQ86TL0 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
ATG4DQ86TL0 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATG4DQ86TL0 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ATG4DQ86TL0 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.38□□□□□ -1.71
ATG4DQ86TL0 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.38□□□□□ -1.71
ATG4DQ86TL0 RNA5SP191-201ENST00000362585 102 ntBASIC4.38□□□□□ -1.71
ATG4DQ86TL0 RNU6-1020P-201ENST00000363684 107 ntBASIC4.38□□□□□ -1.71
ATG4DQ86TL0 RNU6-288P-201ENST00000363690 104 ntBASIC4.38□□□□□ -1.71
ATG4DQ86TL0 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.38□□□□□ -1.71
ATG4DQ86TL0 MTND3P9-201ENST00000429526 346 ntBASIC4.38□□□□□ -1.71
ATG4DQ86TL0 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.38□□□□□ -1.71
ATG4DQ86TL0 CEACAMP1-201ENST00000434624 1035 ntBASIC4.38□□□□□ -1.71
ATG4DQ86TL0 CYCSP43-201ENST00000438233 310 ntBASIC4.38□□□□□ -1.71
ATG4DQ86TL0 AC004938.1-201ENST00000438468 308 ntBASIC4.38□□□□□ -1.71
ATG4DQ86TL0 AC112498.1-201ENST00000444401 332 ntBASIC4.38□□□□□ -1.71
ATG4DQ86TL0 AL162389.1-201ENST00000449233 177 ntBASIC4.38□□□□□ -1.71
ATG4DQ86TL0 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.38□□□□□ -1.71
ATG4DQ86TL0 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.38□□□□□ -1.71
ATG4DQ86TL0 AC007016.1-201ENST00000512110 244 ntBASIC4.38□□□□□ -1.71
ATG4DQ86TL0 RNU6-677P-201ENST00000516914 101 ntBASIC4.38□□□□□ -1.71
ATG4DQ86TL0 RN7SKP60-201ENST00000516985 239 ntBASIC4.38□□□□□ -1.71
ATG4DQ86TL0 SNORA31.18-201ENST00000517043 134 ntBASIC4.38□□□□□ -1.71
ATG4DQ86TL0 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.38□□□□□ -1.71
ATG4DQ86TL0 SYF2P1-201ENST00000550658 413 ntBASIC4.38□□□□□ -1.71
ATG4DQ86TL0 TRAV32-201ENST00000553993 340 ntBASIC4.38□□□□□ -1.71
ATG4DQ86TL0 MIR3936-201ENST00000584304 110 ntBASIC4.38□□□□□ -1.71
ATG4DQ86TL0 AC067852.3-201ENST00000589177 561 ntBASIC4.38□□□□□ -1.71
ATG4DQ86TL0 AL031601.2-202ENST00000622650 282 ntBASIC4.38□□□□□ -1.71
ATG4DQ86TL0 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.38□□□□□ -1.71
ATG4DQ86TL0 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
ATG4DQ86TL0 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.38□□□□□ -1.71
ATG4DQ86TL0 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 147.6 ms