Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC005156.1-201ENST00000613371 573 ntBASIC0.66□□□□□ -2.3
VPS13CQ709C8 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.66□□□□□ -2.3
VPS13CQ709C8 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.66□□□□□ -2.3
VPS13CQ709C8 FAM157A-202ENST00000615155 405 ntBASIC0.66□□□□□ -2.3
VPS13CQ709C8 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.66□□□□□ -2.3
VPS13CQ709C8 TRAPPC2P5-201ENST00000426293 308 ntBASIC0.66□□□□□ -2.3
VPS13CQ709C8 AP001960.1-201ENST00000506494 658 ntBASIC0.66□□□□□ -2.3
VPS13CQ709C8 HMGN1P30-201ENST00000589286 268 ntBASIC0.66□□□□□ -2.3
VPS13CQ709C8 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.66□□□□□ -2.3
VPS13CQ709C8 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.66□□□□□ -2.3
VPS13CQ709C8 MIR203B-201ENST00000636080 86 ntBASIC0.66□□□□□ -2.3
VPS13CQ709C8 RNU6-288P-201ENST00000363690 104 ntBASIC0.65□□□□□ -2.31
VPS13CQ709C8 MIR329-2-201ENST00000385029 84 ntBASIC0.65□□□□□ -2.31
VPS13CQ709C8 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
VPS13CQ709C8 RNU2-70P-201ENST00000410718 179 ntBASIC0.65□□□□□ -2.31
VPS13CQ709C8 MTND2P16-201ENST00000419987 799 ntBASIC0.65□□□□□ -2.31
VPS13CQ709C8 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC0.65□□□□□ -2.31
VPS13CQ709C8 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC0.65□□□□□ -2.31
VPS13CQ709C8 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.65□□□□□ -2.31
VPS13CQ709C8 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC0.65□□□□□ -2.31
VPS13CQ709C8 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
VPS13CQ709C8 AC073544.1-201ENST00000600110 1595 ntBASIC0.65□□□□□ -2.31
VPS13CQ709C8 RPS20P15-201ENST00000412792 311 ntBASIC0.65□□□□□ -2.31
VPS13CQ709C8 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.65□□□□□ -2.31
VPS13CQ709C8 BX682237.1-201ENST00000415016 335 ntBASIC0.65□□□□□ -2.31
VPS13CQ709C8 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.65□□□□□ -2.31
VPS13CQ709C8 GPM6BP3-201ENST00000442797 145 ntBASIC0.65□□□□□ -2.31
VPS13CQ709C8 AL627224.1-201ENST00000448334 444 ntBASIC0.65□□□□□ -2.31
VPS13CQ709C8 HMGB3P21-201ENST00000452483 547 ntBASIC0.65□□□□□ -2.31
VPS13CQ709C8 SUMO2P2-201ENST00000456482 255 ntBASIC0.65□□□□□ -2.31
VPS13CQ709C8 NAP1L1P3-201ENST00000462291 880 ntBASIC0.65□□□□□ -2.31
VPS13CQ709C8 AC008379.1-201ENST00000463655 464 ntBASIC0.65□□□□□ -2.31
VPS13CQ709C8 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.65□□□□□ -2.31
VPS13CQ709C8 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC0.65□□□□□ -2.31
VPS13CQ709C8 AC024595.1-201ENST00000623088 387 ntBASIC0.65□□□□□ -2.31
VPS13CQ709C8 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
VPS13CQ709C8 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.65□□□□□ -2.31
VPS13CQ709C8 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC0.65□□□□□ -2.31
VPS13CQ709C8 DUXAP4-201ENST00000603046 613 ntBASIC0.65□□□□□ -2.31
VPS13CQ709C8 RNU6-178P-201ENST00000384631 104 ntBASIC0.64□□□□□ -2.31
VPS13CQ709C8 USP12PX-201ENST00000432383 1057 ntBASIC0.64□□□□□ -2.31
VPS13CQ709C8 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.64□□□□□ -2.31
VPS13CQ709C8 HSPE1P24-201ENST00000450782 238 ntBASIC0.64□□□□□ -2.31
VPS13CQ709C8 MIR4636-201ENST00000582271 80 ntBASIC0.64□□□□□ -2.31
VPS13CQ709C8 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.64□□□□□ -2.31
VPS13CQ709C8 AC091304.6-201ENST00000619761 202 ntBASIC0.64□□□□□ -2.31
VPS13CQ709C8 uc_338.22-201ENST00000622722 187 ntBASIC0.64□□□□□ -2.31
VPS13CQ709C8 XIST-201ENST00000416330 750 ntTSL 2 BASIC0.64□□□□□ -2.31
VPS13CQ709C8 UBE2FP3-201ENST00000436366 524 ntBASIC0.64□□□□□ -2.31
VPS13CQ709C8 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC0.64□□□□□ -2.31
VPS13CQ709C8 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC0.64□□□□□ -2.31
VPS13CQ709C8 AC022880.1-201ENST00000534017 973 ntBASIC0.64□□□□□ -2.31
VPS13CQ709C8 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC0.64□□□□□ -2.31
VPS13CQ709C8 Y_RNA.488-201ENST00000384403 102 ntBASIC0.63□□□□□ -2.31
VPS13CQ709C8 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
VPS13CQ709C8 AC117503.1-201ENST00000472241 394 ntBASIC0.63□□□□□ -2.31
VPS13CQ709C8 BTF3P12-201ENST00000519620 469 ntBASIC0.63□□□□□ -2.31
VPS13CQ709C8 CYCSP26-201ENST00000534107 320 ntBASIC0.63□□□□□ -2.31
VPS13CQ709C8 RPS15AP11-201ENST00000594193 385 ntBASIC0.63□□□□□ -2.31
VPS13CQ709C8 BNIP3P26-201ENST00000600827 554 ntBASIC0.63□□□□□ -2.31
VPS13CQ709C8 AC020658.4-201ENST00000613987 684 ntBASIC0.63□□□□□ -2.31
VPS13CQ709C8 AC007792.1-201ENST00000623023 402 ntBASIC0.63□□□□□ -2.31
VPS13CQ709C8 AC068787.1-201ENST00000623908 691 ntBASIC0.63□□□□□ -2.31
VPS13CQ709C8 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC0.63□□□□□ -2.31
VPS13CQ709C8 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
VPS13CQ709C8 AC104692.1-201ENST00000472406 90 ntBASIC0.63□□□□□ -2.31
VPS13CQ709C8 AC023141.11-201ENST00000508864 202 ntBASIC0.63□□□□□ -2.31
VPS13CQ709C8 RNA5SP285-201ENST00000516619 119 ntBASIC0.63□□□□□ -2.31
VPS13CQ709C8 AC005786.1-201ENST00000588553 154 ntBASIC0.63□□□□□ -2.31
VPS13CQ709C8 Xist_exon1.1-201ENST00000618930 85 ntBASIC0.63□□□□□ -2.31
VPS13CQ709C8 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC0.63□□□□□ -2.31
VPS13CQ709C8 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC0.63□□□□□ -2.31
VPS13CQ709C8 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC0.63□□□□□ -2.31
VPS13CQ709C8 AC103810.9-201ENST00000606688 112 ntBASIC0.63□□□□□ -2.31
VPS13CQ709C8 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC0.63□□□□□ -2.31
VPS13CQ709C8 MTND4P27-201ENST00000450813 1354 ntBASIC0.63□□□□□ -2.31
VPS13CQ709C8 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
VPS13CQ709C8 AL161651.1-201ENST00000440882 223 ntBASIC0.62□□□□□ -2.31
VPS13CQ709C8 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.62□□□□□ -2.31
VPS13CQ709C8 AC104685.1-201ENST00000502445 371 ntBASIC0.62□□□□□ -2.31
VPS13CQ709C8 AC239860.2-201ENST00000525886 270 ntBASIC0.62□□□□□ -2.31
VPS13CQ709C8 AC013244.2-201ENST00000603396 103 ntBASIC0.62□□□□□ -2.31
VPS13CQ709C8 AC083899.3-201ENST00000603413 594 ntBASIC0.62□□□□□ -2.31
VPS13CQ709C8 YWHAQP7-201ENST00000603536 658 ntBASIC0.62□□□□□ -2.31
VPS13CQ709C8 AC091932.3-201ENST00000624223 323 ntBASIC0.62□□□□□ -2.31
VPS13CQ709C8 AC083923.1-201ENST00000523708 376 ntBASIC0.62□□□□□ -2.31
VPS13CQ709C8 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.62□□□□□ -2.31
VPS13CQ709C8 ARPC3P2-201ENST00000457786 533 ntBASIC0.62□□□□□ -2.31
VPS13CQ709C8 MTCO1P30-201ENST00000515244 580 ntBASIC0.62□□□□□ -2.31
VPS13CQ709C8 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.62□□□□□ -2.31
VPS13CQ709C8 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.62□□□□□ -2.31
VPS13CQ709C8 HSPE1P14-201ENST00000605812 302 ntBASIC0.62□□□□□ -2.31
VPS13CQ709C8 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
VPS13CQ709C8 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.62□□□□□ -2.31
VPS13CQ709C8 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
VPS13CQ709C8 RNU6-418P-201ENST00000384035 107 ntBASIC0.61□□□□□ -2.31
VPS13CQ709C8 Z96811.1-201ENST00000445880 108 ntBASIC0.61□□□□□ -2.31
VPS13CQ709C8 AC121161.1-201ENST00000510606 652 ntBASIC0.61□□□□□ -2.31
VPS13CQ709C8 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC0.61□□□□□ -2.31
VPS13CQ709C8 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms