Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.04□□□□□ -1.44
VARS2Q5ST30 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.04□□□□□ -1.44
VARS2Q5ST30 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.04□□□□□ -1.44
VARS2Q5ST30 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
VARS2Q5ST30 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
VARS2Q5ST30 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VARS2Q5ST30 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.04□□□□□ -1.44
VARS2Q5ST30 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.04□□□□□ -1.44
VARS2Q5ST30 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
VARS2Q5ST30 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VARS2Q5ST30 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VARS2Q5ST30 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VARS2Q5ST30 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VARS2Q5ST30 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
VARS2Q5ST30 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
VARS2Q5ST30 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
VARS2Q5ST30 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
VARS2Q5ST30 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC6.03□□□□□ -1.44
VARS2Q5ST30 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VARS2Q5ST30 AC020656.2-201ENST00000613291 5309 ntBASIC6.03□□□□□ -1.44
VARS2Q5ST30 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
VARS2Q5ST30 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
VARS2Q5ST30 Y_RNA.319-201ENST00000365138 92 ntBASIC6.03□□□□□ -1.44
VARS2Q5ST30 RNU6-1286P-201ENST00000383871 107 ntBASIC6.03□□□□□ -1.44
VARS2Q5ST30 SNORA20B-201ENST00000384220 132 ntBASIC6.03□□□□□ -1.44
VARS2Q5ST30 MIR301A-201ENST00000385261 86 ntBASIC6.03□□□□□ -1.44
VARS2Q5ST30 RNU6-159P-201ENST00000391080 106 ntBASIC6.03□□□□□ -1.44
VARS2Q5ST30 Y_RNA.617-201ENST00000410920 90 ntBASIC6.03□□□□□ -1.44
VARS2Q5ST30 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.03□□□□□ -1.44
VARS2Q5ST30 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.03□□□□□ -1.44
VARS2Q5ST30 AL590399.6-201ENST00000446396 307 ntBASIC6.03□□□□□ -1.44
VARS2Q5ST30 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.03□□□□□ -1.44
VARS2Q5ST30 AC108161.1-201ENST00000461060 402 ntBASIC6.03□□□□□ -1.44
VARS2Q5ST30 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC6.03□□□□□ -1.44
VARS2Q5ST30 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VARS2Q5ST30 RNU6-155P-201ENST00000516347 100 ntBASIC6.03□□□□□ -1.44
VARS2Q5ST30 AC090142.3-201ENST00000519012 385 ntBASIC6.03□□□□□ -1.44
VARS2Q5ST30 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC6.03□□□□□ -1.44
VARS2Q5ST30 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.03□□□□□ -1.44
VARS2Q5ST30 AC006115.2-201ENST00000596823 202 ntBASIC6.03□□□□□ -1.44
VARS2Q5ST30 MIR8080-201ENST00000622224 89 ntBASIC6.03□□□□□ -1.44
VARS2Q5ST30 AC009541.1-201ENST00000438279 2662 ntBASIC6.03□□□□□ -1.44
VARS2Q5ST30 SAGE4P-201ENST00000442271 3381 ntBASIC6.03□□□□□ -1.44
VARS2Q5ST30 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VARS2Q5ST30 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
VARS2Q5ST30 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
VARS2Q5ST30 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VARS2Q5ST30 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
VARS2Q5ST30 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VARS2Q5ST30 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.02□□□□□ -1.44
VARS2Q5ST30 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
VARS2Q5ST30 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
VARS2Q5ST30 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VARS2Q5ST30 AL591135.1-201ENST00000401578 5914 ntBASIC6.02□□□□□ -1.45
VARS2Q5ST30 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VARS2Q5ST30 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
VARS2Q5ST30 Y_RNA.24-201ENST00000362508 103 ntBASIC6.02□□□□□ -1.45
VARS2Q5ST30 RNA5SP507-201ENST00000363603 121 ntBASIC6.02□□□□□ -1.45
VARS2Q5ST30 RNU6-1082P-201ENST00000364574 107 ntBASIC6.02□□□□□ -1.45
VARS2Q5ST30 Y_RNA.281-201ENST00000364774 94 ntBASIC6.02□□□□□ -1.45
VARS2Q5ST30 SNORA51.10-201ENST00000384418 136 ntBASIC6.02□□□□□ -1.45
VARS2Q5ST30 RPL21P66-201ENST00000426566 466 ntBASIC6.02□□□□□ -1.45
VARS2Q5ST30 AC245047.8-201ENST00000456455 284 ntBASIC6.02□□□□□ -1.45
VARS2Q5ST30 SNRPCP3-201ENST00000474888 476 ntBASIC6.02□□□□□ -1.45
VARS2Q5ST30 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC6.02□□□□□ -1.45
VARS2Q5ST30 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.02□□□□□ -1.45
VARS2Q5ST30 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.02□□□□□ -1.45
VARS2Q5ST30 RNU6-377P-201ENST00000515965 102 ntBASIC6.02□□□□□ -1.45
VARS2Q5ST30 AC008489.1-201ENST00000524271 483 ntBASIC6.02□□□□□ -1.45
VARS2Q5ST30 AP003730.1-201ENST00000524605 285 ntBASIC6.02□□□□□ -1.45
VARS2Q5ST30 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.02□□□□□ -1.45
VARS2Q5ST30 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC6.02□□□□□ -1.45
VARS2Q5ST30 FKBP1AP1-201ENST00000594588 318 ntBASIC6.02□□□□□ -1.45
VARS2Q5ST30 MIR6820-201ENST00000611508 62 ntBASIC6.02□□□□□ -1.45
VARS2Q5ST30 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VARS2Q5ST30 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
VARS2Q5ST30 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VARS2Q5ST30 Z82209.1-201ENST00000422141 2135 ntBASIC6.02□□□□□ -1.45
VARS2Q5ST30 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.02□□□□□ -1.45
VARS2Q5ST30 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
VARS2Q5ST30 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
VARS2Q5ST30 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VARS2Q5ST30 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.02□□□□□ -1.45
VARS2Q5ST30 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.02□□□□□ -1.45
VARS2Q5ST30 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VARS2Q5ST30 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VARS2Q5ST30 AL353743.1-202ENST00000431724 1695 ntBASIC6.01□□□□□ -1.45
VARS2Q5ST30 AC025470.1-201ENST00000510053 2032 ntBASIC6.01□□□□□ -1.45
VARS2Q5ST30 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC6.01□□□□□ -1.45
VARS2Q5ST30 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VARS2Q5ST30 AL034546.1-201ENST00000623740 3693 ntBASIC6.01□□□□□ -1.45
VARS2Q5ST30 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VARS2Q5ST30 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VARS2Q5ST30 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VARS2Q5ST30 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.01□□□□□ -1.45
VARS2Q5ST30 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.01□□□□□ -1.45
VARS2Q5ST30 RNA5SP319-201ENST00000362768 119 ntBASIC6.01□□□□□ -1.45
VARS2Q5ST30 RNU6-137P-201ENST00000363680 108 ntBASIC6.01□□□□□ -1.45
VARS2Q5ST30 RNU6-728P-201ENST00000365375 104 ntBASIC6.01□□□□□ -1.45
VARS2Q5ST30 RNU6-1296P-201ENST00000383879 107 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms