Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 CLIC4P2-201ENST00000601934 717 ntBASIC3.54□□□□□ -1.84
ALFQ53S48 AC174048.1-201ENST00000603389 144 ntBASIC3.54□□□□□ -1.84
ALFQ53S48 AC024220.1-201ENST00000603675 484 ntBASIC3.54□□□□□ -1.84
ALFQ53S48 AL451064.1-201ENST00000607718 471 ntBASIC3.54□□□□□ -1.84
ALFQ53S48 AC004832.5-201ENST00000608677 401 ntBASIC3.54□□□□□ -1.84
ALFQ53S48 AC019176.2-201ENST00000611579 315 ntBASIC3.54□□□□□ -1.84
ALFQ53S48 AC131902.3-201ENST00000611767 581 ntBASIC3.54□□□□□ -1.84
ALFQ53S48 AC091304.9-201ENST00000612091 226 ntBASIC3.54□□□□□ -1.84
ALFQ53S48 AL133173.2-201ENST00000614270 90 ntBASIC3.54□□□□□ -1.84
ALFQ53S48 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.54□□□□□ -1.84
ALFQ53S48 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
ALFQ53S48 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
ALFQ53S48 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.54□□□□□ -1.84
ALFQ53S48 MFSD8-233ENST00000641482 4860 ntBASIC3.54□□□□□ -1.84
ALFQ53S48 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ALFQ53S48 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ALFQ53S48 AL021368.2-201ENST00000606125 5352 ntBASIC3.53□□□□□ -1.84
ALFQ53S48 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
ALFQ53S48 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ALFQ53S48 ZNF519P1-201ENST00000449011 1626 ntBASIC3.53□□□□□ -1.84
ALFQ53S48 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.53□□□□□ -1.84
ALFQ53S48 RNA5SP197-201ENST00000363357 119 ntBASIC3.53□□□□□ -1.84
ALFQ53S48 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.53□□□□□ -1.84
ALFQ53S48 MIR7-3-201ENST00000384898 110 ntBASIC3.53□□□□□ -1.84
ALFQ53S48 BX323014.1-201ENST00000412876 237 ntBASIC3.53□□□□□ -1.84
ALFQ53S48 RPS15AP6-201ENST00000420703 385 ntBASIC3.53□□□□□ -1.84
ALFQ53S48 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.53□□□□□ -1.84
ALFQ53S48 SAR1AP4-201ENST00000429225 591 ntBASIC3.53□□□□□ -1.84
ALFQ53S48 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.53□□□□□ -1.84
ALFQ53S48 AL591212.2-201ENST00000433923 257 ntBASIC3.53□□□□□ -1.84
ALFQ53S48 AL357552.1-201ENST00000445254 415 ntBASIC3.53□□□□□ -1.84
ALFQ53S48 AC004801.2-202ENST00000463559 283 ntBASIC3.53□□□□□ -1.84
ALFQ53S48 AC128713.1-201ENST00000471495 306 ntBASIC3.53□□□□□ -1.84
ALFQ53S48 AC105252.1-201ENST00000503089 286 ntBASIC3.53□□□□□ -1.84
ALFQ53S48 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.53□□□□□ -1.84
ALFQ53S48 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.53□□□□□ -1.84
ALFQ53S48 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.53□□□□□ -1.84
ALFQ53S48 RNU1-103P-201ENST00000516502 125 ntBASIC3.53□□□□□ -1.84
ALFQ53S48 RNU2-46P-201ENST00000517038 113 ntBASIC3.53□□□□□ -1.84
ALFQ53S48 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.53□□□□□ -1.84
ALFQ53S48 H3F3AP1-201ENST00000559984 334 ntBASIC3.53□□□□□ -1.84
ALFQ53S48 AC137800.2-201ENST00000574375 120 ntBASIC3.53□□□□□ -1.84
ALFQ53S48 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.53□□□□□ -1.84
ALFQ53S48 AL592295.2-201ENST00000612578 206 ntBASIC3.53□□□□□ -1.84
ALFQ53S48 AP001506.1-201ENST00000615444 211 ntBASIC3.53□□□□□ -1.84
ALFQ53S48 AL355365.1-201ENST00000616480 294 ntBASIC3.53□□□□□ -1.84
ALFQ53S48 MIR7975-201ENST00000619350 68 ntBASIC3.53□□□□□ -1.84
ALFQ53S48 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
ALFQ53S48 MIR7153-201ENST00000637758 57 ntBASIC3.53□□□□□ -1.84
ALFQ53S48 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ALFQ53S48 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ALFQ53S48 AC032011.1-201ENST00000611703 1549 ntBASIC3.53□□□□□ -1.84
ALFQ53S48 AL049781.1-201ENST00000623195 3585 ntBASIC3.53□□□□□ -1.84
ALFQ53S48 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ALFQ53S48 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ALFQ53S48 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ALFQ53S48 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ALFQ53S48 RNU6-778P-201ENST00000363269 103 ntBASIC3.52□□□□□ -1.85
ALFQ53S48 SNORA20.2-201ENST00000383922 131 ntBASIC3.52□□□□□ -1.85
ALFQ53S48 RPS3AP36-201ENST00000398190 775 ntBASIC3.52□□□□□ -1.85
ALFQ53S48 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.52□□□□□ -1.85
ALFQ53S48 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.52□□□□□ -1.85
ALFQ53S48 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.52□□□□□ -1.85
ALFQ53S48 AL358075.3-201ENST00000426289 226 ntBASIC3.52□□□□□ -1.85
ALFQ53S48 AP000907.1-201ENST00000428428 510 ntBASIC3.52□□□□□ -1.85
ALFQ53S48 AC097713.2-201ENST00000430199 356 ntBASIC3.52□□□□□ -1.85
ALFQ53S48 WASF1P1-201ENST00000447560 1131 ntBASIC3.52□□□□□ -1.85
ALFQ53S48 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.52□□□□□ -1.85
ALFQ53S48 AC007182.2-201ENST00000489251 402 ntBASIC3.52□□□□□ -1.85
ALFQ53S48 RPS27AP10-201ENST00000496103 208 ntBASIC3.52□□□□□ -1.85
ALFQ53S48 AC009901.1-201ENST00000506703 541 ntBASIC3.52□□□□□ -1.85
ALFQ53S48 AC026784.1-201ENST00000507986 352 ntBASIC3.52□□□□□ -1.85
ALFQ53S48 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.52□□□□□ -1.85
ALFQ53S48 RN7SKP282-201ENST00000516824 299 ntBASIC3.52□□□□□ -1.85
ALFQ53S48 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.52□□□□□ -1.85
ALFQ53S48 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.52□□□□□ -1.85
ALFQ53S48 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.52□□□□□ -1.85
ALFQ53S48 AC012414.6-201ENST00000568241 401 ntBASIC3.52□□□□□ -1.85
ALFQ53S48 AC005771.1-201ENST00000585581 349 ntBASIC3.52□□□□□ -1.85
ALFQ53S48 AC012468.1-201ENST00000604888 430 ntBASIC3.52□□□□□ -1.85
ALFQ53S48 AC013562.2-201ENST00000611632 603 ntBASIC3.52□□□□□ -1.85
ALFQ53S48 RNVU1-4-201ENST00000612985 164 ntBASIC3.52□□□□□ -1.85
ALFQ53S48 AC011939.3-201ENST00000613686 466 ntBASIC3.52□□□□□ -1.85
ALFQ53S48 AC004777.1-201ENST00000624317 287 ntBASIC3.52□□□□□ -1.85
ALFQ53S48 AC110994.2-201ENST00000635481 492 ntBASIC3.52□□□□□ -1.85
ALFQ53S48 AL512643.1-201ENST00000635735 524 ntBASIC3.52□□□□□ -1.85
ALFQ53S48 U2.21-201ENST00000637295 81 ntBASIC3.52□□□□□ -1.85
ALFQ53S48 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.52□□□□□ -1.85
ALFQ53S48 AC007496.3-201ENST00000624987 3443 ntBASIC3.52□□□□□ -1.85
ALFQ53S48 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ALFQ53S48 AL356274.2-201ENST00000624379 3752 ntBASIC3.51□□□□□ -1.85
ALFQ53S48 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
ALFQ53S48 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
ALFQ53S48 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.51□□□□□ -1.85
ALFQ53S48 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ALFQ53S48 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ALFQ53S48 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
ALFQ53S48 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.51□□□□□ -1.85
ALFQ53S48 SNORA63.1-201ENST00000362493 131 ntBASIC3.51□□□□□ -1.85
ALFQ53S48 U8.3-201ENST00000363321 132 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms