Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 RNU6-755P-201ENST00000364400 103 ntBASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 RNU6-312P-201ENST00000364629 107 ntBASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 RNU4-56P-201ENST00000364700 142 ntBASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 Y_RNA.405-201ENST00000383979 100 ntBASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 Y_RNA.451-201ENST00000384200 100 ntBASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 Y_RNA.524-201ENST00000384564 100 ntBASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 Y_RNA.561-201ENST00000384694 100 ntBASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 RPS23P10-201ENST00000416185 486 ntBASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 RPL30P13-201ENST00000418873 348 ntBASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 EBAG9P1-201ENST00000418955 543 ntBASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 TMEM183AP1-205ENST00000432739 290 ntBASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 AC005002.2-201ENST00000438228 269 ntBASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 HMGB3P3-201ENST00000510526 400 ntBASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 SNORA27.4-201ENST00000516650 95 ntBASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 MIR4691-201ENST00000583764 85 ntBASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 AC005828.6-201ENST00000606610 232 ntBASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTC1Q2NKJ3 RNA5SP326-201ENST00000363209 110 ntBASIC5.59□□□□□ -1.51
CTC1Q2NKJ3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CTC1Q2NKJ3 Y_RNA.412-201ENST00000384001 104 ntBASIC5.59□□□□□ -1.51
CTC1Q2NKJ3 MIR600-201ENST00000385007 98 ntBASIC5.59□□□□□ -1.51
CTC1Q2NKJ3 SNORA12.2-201ENST00000391040 156 ntBASIC5.59□□□□□ -1.51
CTC1Q2NKJ3 AL358453.1-201ENST00000422522 250 ntBASIC5.59□□□□□ -1.51
CTC1Q2NKJ3 EZH2P1-201ENST00000431167 291 ntBASIC5.59□□□□□ -1.51
CTC1Q2NKJ3 AC127537.2-201ENST00000439258 465 ntBASIC5.59□□□□□ -1.51
CTC1Q2NKJ3 RPL37P6-201ENST00000460682 294 ntBASIC5.59□□□□□ -1.51
CTC1Q2NKJ3 AC008481.1-201ENST00000463278 396 ntBASIC5.59□□□□□ -1.51
CTC1Q2NKJ3 AC034236.1-201ENST00000469891 373 ntBASIC5.59□□□□□ -1.51
CTC1Q2NKJ3 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.59□□□□□ -1.51
CTC1Q2NKJ3 AC010683.1-201ENST00000473673 378 ntBASIC5.59□□□□□ -1.51
CTC1Q2NKJ3 AC010631.1-201ENST00000474150 156 ntBASIC5.59□□□□□ -1.51
CTC1Q2NKJ3 VN1R105P-201ENST00000486595 910 ntBASIC5.59□□□□□ -1.51
CTC1Q2NKJ3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.59□□□□□ -1.51
CTC1Q2NKJ3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.59□□□□□ -1.51
CTC1Q2NKJ3 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.59□□□□□ -1.51
CTC1Q2NKJ3 AC025588.3-201ENST00000604182 274 ntBASIC5.59□□□□□ -1.51
CTC1Q2NKJ3 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.59□□□□□ -1.51
CTC1Q2NKJ3 AC009318.2-201ENST00000610917 651 ntBASIC5.59□□□□□ -1.51
CTC1Q2NKJ3 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.59□□□□□ -1.51
CTC1Q2NKJ3 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.59□□□□□ -1.51
CTC1Q2NKJ3 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CTC1Q2NKJ3 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
CTC1Q2NKJ3 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
CTC1Q2NKJ3 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CTC1Q2NKJ3 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.59□□□□□ -1.52
CTC1Q2NKJ3 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CTC1Q2NKJ3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 AC239868.2-201ENST00000564237 4527 ntBASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 AC000374.1-201ENST00000434698 1745 ntBASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 RNA5SP505-201ENST00000364748 108 ntBASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 RNU6-21P-201ENST00000384710 107 ntBASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 RNU6-476P-201ENST00000384726 107 ntBASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 RNU2-21P-201ENST00000410368 188 ntBASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 KNOP1P3-201ENST00000446933 426 ntBASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 RNU6-677P-201ENST00000516914 101 ntBASIC5.58□□□□□ -1.52
CTC1Q2NKJ3 MIR2355-201ENST00000517199 87 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms