Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 AC106872.3-201ENST00000495104 446 ntBASIC3.64□□□□□ -1.83
CCDC96Q2M329 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC96Q2M329 AC008885.1-201ENST00000514930 301 ntBASIC3.64□□□□□ -1.83
CCDC96Q2M329 FABP5P5-201ENST00000515537 406 ntBASIC3.64□□□□□ -1.83
CCDC96Q2M329 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC96Q2M329 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC96Q2M329 AGGF1P4-201ENST00000568249 801 ntBASIC3.64□□□□□ -1.83
CCDC96Q2M329 AC012213.3-201ENST00000577199 777 ntBASIC3.64□□□□□ -1.83
CCDC96Q2M329 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC96Q2M329 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC96Q2M329 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC96Q2M329 AC004852.3-201ENST00000614131 326 ntBASIC3.64□□□□□ -1.83
CCDC96Q2M329 AC009268.2-201ENST00000621925 457 ntBASIC3.64□□□□□ -1.83
CCDC96Q2M329 OR5H6-203ENST00000642105 978 ntBASIC3.64□□□□□ -1.83
CCDC96Q2M329 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC96Q2M329 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC96Q2M329 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC96Q2M329 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CCDC96Q2M329 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CCDC96Q2M329 RNA5SP383-201ENST00000362934 120 ntBASIC3.63□□□□□ -1.83
CCDC96Q2M329 SNORD56.3-201ENST00000363507 71 ntBASIC3.63□□□□□ -1.83
CCDC96Q2M329 RNU6-289P-201ENST00000364093 107 ntBASIC3.63□□□□□ -1.83
CCDC96Q2M329 RNU4-75P-201ENST00000364621 146 ntBASIC3.63□□□□□ -1.83
CCDC96Q2M329 Y_RNA.505-201ENST00000384489 102 ntBASIC3.63□□□□□ -1.83
CCDC96Q2M329 SNORD15B-201ENST00000384714 146 ntBASIC3.63□□□□□ -1.83
CCDC96Q2M329 NDUFB4P4-201ENST00000404822 243 ntBASIC3.63□□□□□ -1.83
CCDC96Q2M329 RNA5SP293-201ENST00000410527 113 ntBASIC3.63□□□□□ -1.83
CCDC96Q2M329 RPL17P12-201ENST00000413391 526 ntBASIC3.63□□□□□ -1.83
CCDC96Q2M329 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC96Q2M329 RPL37P21-201ENST00000435890 276 ntBASIC3.63□□□□□ -1.83
CCDC96Q2M329 UBE2V1P13-201ENST00000436983 439 ntBASIC3.63□□□□□ -1.83
CCDC96Q2M329 AP000542.1-201ENST00000448473 371 ntBASIC3.63□□□□□ -1.83
CCDC96Q2M329 AC125238.1-201ENST00000448842 249 ntBASIC3.63□□□□□ -1.83
CCDC96Q2M329 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC96Q2M329 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC96Q2M329 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC96Q2M329 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC96Q2M329 MTND5P4-201ENST00000514978 288 ntBASIC3.63□□□□□ -1.83
CCDC96Q2M329 RNU6-840P-201ENST00000517275 65 ntBASIC3.63□□□□□ -1.83
CCDC96Q2M329 AC009812.2-201ENST00000517657 457 ntBASIC3.63□□□□□ -1.83
CCDC96Q2M329 AC013828.2-201ENST00000532487 235 ntBASIC3.63□□□□□ -1.83
CCDC96Q2M329 AC007536.1-201ENST00000533382 349 ntBASIC3.63□□□□□ -1.83
CCDC96Q2M329 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC96Q2M329 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC96Q2M329 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.63□□□□□ -1.83
CCDC96Q2M329 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC96Q2M329 AC103591.3-201ENST00000608684 209 ntBASIC3.63□□□□□ -1.83
CCDC96Q2M329 AC104010.1-201ENST00000616889 150 ntBASIC3.63□□□□□ -1.83
CCDC96Q2M329 MIR622-201ENST00000638396 96 ntBASIC3.63□□□□□ -1.83
CCDC96Q2M329 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC96Q2M329 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC96Q2M329 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC96Q2M329 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC96Q2M329 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CCDC96Q2M329 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CCDC96Q2M329 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC96Q2M329 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC96Q2M329 RNU6-198P-201ENST00000384258 104 ntBASIC3.62□□□□□ -1.83
CCDC96Q2M329 RPL21P75-201ENST00000396599 483 ntBASIC3.62□□□□□ -1.83
CCDC96Q2M329 DEFB108C-201ENST00000400154 252 ntBASIC3.62□□□□□ -1.83
CCDC96Q2M329 RPL21P28-201ENST00000401418 483 ntBASIC3.62□□□□□ -1.83
CCDC96Q2M329 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC96Q2M329 AL592114.1-201ENST00000403842 483 ntBASIC3.62□□□□□ -1.83
CCDC96Q2M329 MIR320C1-201ENST00000408566 88 ntBASIC3.62□□□□□ -1.83
CCDC96Q2M329 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC96Q2M329 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC96Q2M329 SDCBPP3-201ENST00000419629 891 ntBASIC3.62□□□□□ -1.83
CCDC96Q2M329 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC96Q2M329 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC96Q2M329 AL031667.1-201ENST00000440222 725 ntBASIC3.62□□□□□ -1.83
CCDC96Q2M329 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC96Q2M329 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC96Q2M329 RPL21P39-201ENST00000463605 483 ntBASIC3.62□□□□□ -1.83
CCDC96Q2M329 S100A11P2-201ENST00000467589 312 ntBASIC3.62□□□□□ -1.83
CCDC96Q2M329 RPL21P93-201ENST00000480465 489 ntBASIC3.62□□□□□ -1.83
CCDC96Q2M329 AC233702.1-201ENST00000482905 502 ntBASIC3.62□□□□□ -1.83
CCDC96Q2M329 AC087190.1-201ENST00000484462 480 ntBASIC3.62□□□□□ -1.83
CCDC96Q2M329 AC093591.1-201ENST00000491435 481 ntBASIC3.62□□□□□ -1.83
CCDC96Q2M329 RPL21P16-201ENST00000495531 483 ntBASIC3.62□□□□□ -1.83
CCDC96Q2M329 RN7SKP272-201ENST00000516988 232 ntBASIC3.62□□□□□ -1.83
CCDC96Q2M329 AP003033.1-201ENST00000527244 415 ntBASIC3.62□□□□□ -1.83
CCDC96Q2M329 AC022080.3-201ENST00000544433 482 ntBASIC3.62□□□□□ -1.83
CCDC96Q2M329 AL627309.6-201ENST00000606857 840 ntBASIC3.62□□□□□ -1.83
CCDC96Q2M329 AC103710.4-201ENST00000609301 899 ntBASIC3.62□□□□□ -1.83
CCDC96Q2M329 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.62□□□□□ -1.83
CCDC96Q2M329 AC090132.2-201ENST00000615881 347 ntBASIC3.62□□□□□ -1.83
CCDC96Q2M329 AL603839.4-201ENST00000624658 1005 ntBASIC3.62□□□□□ -1.83
CCDC96Q2M329 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC96Q2M329 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC96Q2M329 DDX10P1-201ENST00000448545 1933 ntBASIC3.62□□□□□ -1.83
CCDC96Q2M329 AC092447.10-201ENST00000620607 1652 ntBASIC3.62□□□□□ -1.83
CCDC96Q2M329 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC96Q2M329 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CCDC96Q2M329 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC96Q2M329 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC96Q2M329 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC96Q2M329 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC96Q2M329 SNORA36C-201ENST00000384289 132 ntBASIC3.61□□□□□ -1.83
CCDC96Q2M329 RNU6-1119P-201ENST00000384349 108 ntBASIC3.61□□□□□ -1.83
CCDC96Q2M329 Y_RNA.559-201ENST00000384686 107 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms