Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.6□□□□□ -1.83
PMS2P54278 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.6□□□□□ -1.83
PMS2P54278 AL035423.1-201ENST00000420331 213 ntBASIC3.6□□□□□ -1.83
PMS2P54278 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
PMS2P54278 AC233728.2-201ENST00000425348 757 ntBASIC3.6□□□□□ -1.83
PMS2P54278 OR4K11P-201ENST00000431829 904 ntBASIC3.6□□□□□ -1.83
PMS2P54278 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.6□□□□□ -1.83
PMS2P54278 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.6□□□□□ -1.83
PMS2P54278 RPL23AP20-201ENST00000447965 421 ntBASIC3.6□□□□□ -1.83
PMS2P54278 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.6□□□□□ -1.83
PMS2P54278 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.6□□□□□ -1.83
PMS2P54278 AC023194.1-201ENST00000493084 308 ntBASIC3.6□□□□□ -1.83
PMS2P54278 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.6□□□□□ -1.83
PMS2P54278 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.6□□□□□ -1.83
PMS2P54278 Y_RNA.693-201ENST00000516641 110 ntBASIC3.6□□□□□ -1.83
PMS2P54278 HMGN1P28-201ENST00000521340 364 ntBASIC3.6□□□□□ -1.83
PMS2P54278 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.6□□□□□ -1.83
PMS2P54278 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PMS2P54278 TRAV37-201ENST00000553906 342 ntBASIC3.6□□□□□ -1.83
PMS2P54278 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.6□□□□□ -1.83
PMS2P54278 AC068790.3-201ENST00000602988 553 ntBASIC3.6□□□□□ -1.83
PMS2P54278 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.6□□□□□ -1.83
PMS2P54278 AC002553.4-201ENST00000616896 331 ntBASIC3.6□□□□□ -1.83
PMS2P54278 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.6□□□□□ -1.83
PMS2P54278 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.6□□□□□ -1.83
PMS2P54278 MIR1321-201ENST00000637766 79 ntBASIC3.6□□□□□ -1.83
PMS2P54278 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.6□□□□□ -1.83
PMS2P54278 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.6□□□□□ -1.83
PMS2P54278 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PMS2P54278 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PMS2P54278 AC073346.2-201ENST00000624724 2058 ntBASIC3.59□□□□□ -1.83
PMS2P54278 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PMS2P54278 AC007823.1-201ENST00000569932 1566 ntBASIC3.59□□□□□ -1.83
PMS2P54278 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
PMS2P54278 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
PMS2P54278 AC009812.4-201ENST00000569134 1805 ntBASIC3.59□□□□□ -1.83
PMS2P54278 Y_RNA.159-201ENST00000363674 87 ntBASIC3.59□□□□□ -1.83
PMS2P54278 RNU6-805P-201ENST00000365643 106 ntBASIC3.59□□□□□ -1.83
PMS2P54278 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PMS2P54278 Y_RNA.390-201ENST00000383932 102 ntBASIC3.59□□□□□ -1.83
PMS2P54278 RNU6-637P-201ENST00000384050 107 ntBASIC3.59□□□□□ -1.83
PMS2P54278 Y_RNA.453-201ENST00000384223 109 ntBASIC3.59□□□□□ -1.83
PMS2P54278 Y_RNA.481-201ENST00000384373 102 ntBASIC3.59□□□□□ -1.83
PMS2P54278 MIR491-201ENST00000384877 84 ntBASIC3.59□□□□□ -1.83
PMS2P54278 MIR183-201ENST00000384958 110 ntBASIC3.59□□□□□ -1.83
PMS2P54278 RPL7P60-201ENST00000397636 735 ntBASIC3.59□□□□□ -1.83
PMS2P54278 RPS3AP24-201ENST00000407896 734 ntBASIC3.59□□□□□ -1.83
PMS2P54278 RNU4-65P-201ENST00000410473 140 ntBASIC3.59□□□□□ -1.83
PMS2P54278 RN7SKP53-201ENST00000411337 315 ntBASIC3.59□□□□□ -1.83
PMS2P54278 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.59□□□□□ -1.83
PMS2P54278 RPL23AP82-202ENST00000427528 469 ntBASIC3.59□□□□□ -1.83
PMS2P54278 FCF1P1-201ENST00000432690 571 ntBASIC3.59□□□□□ -1.83
PMS2P54278 AC024082.2-201ENST00000434771 238 ntBASIC3.59□□□□□ -1.83
PMS2P54278 HSPD1P21-201ENST00000436541 245 ntBASIC3.59□□□□□ -1.83
PMS2P54278 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
PMS2P54278 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.59□□□□□ -1.83
PMS2P54278 PRDX3P3-201ENST00000447765 522 ntBASIC3.59□□□□□ -1.83
PMS2P54278 CENPBD1P1-201ENST00000464061 469 ntBASIC3.59□□□□□ -1.83
PMS2P54278 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.59□□□□□ -1.83
PMS2P54278 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.59□□□□□ -1.83
PMS2P54278 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.59□□□□□ -1.83
PMS2P54278 AC074344.1-201ENST00000512823 224 ntBASIC3.59□□□□□ -1.83
PMS2P54278 SNORA70.24-201ENST00000517233 118 ntBASIC3.59□□□□□ -1.83
PMS2P54278 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.59□□□□□ -1.83
PMS2P54278 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.59□□□□□ -1.83
PMS2P54278 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.59□□□□□ -1.83
PMS2P54278 OR4T1P-201ENST00000554933 911 ntBASIC3.59□□□□□ -1.83
PMS2P54278 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.59□□□□□ -1.83
PMS2P54278 MED28P6-201ENST00000558776 231 ntBASIC3.59□□□□□ -1.83
PMS2P54278 MIR5187-201ENST00000583479 76 ntBASIC3.59□□□□□ -1.83
PMS2P54278 AP001029.3-201ENST00000588063 596 ntBASIC3.59□□□□□ -1.83
PMS2P54278 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.59□□□□□ -1.83
PMS2P54278 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.59□□□□□ -1.83
PMS2P54278 KC877982.1-201ENST00000602313 470 ntBASIC3.59□□□□□ -1.83
PMS2P54278 MIR98-201ENST00000606724 119 ntBASIC3.59□□□□□ -1.83
PMS2P54278 AP001330.5-201ENST00000607176 411 ntBASIC3.59□□□□□ -1.83
PMS2P54278 AP001596.2-201ENST00000608410 312 ntBASIC3.59□□□□□ -1.83
PMS2P54278 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.59□□□□□ -1.83
PMS2P54278 uc_338.12-201ENST00000616344 181 ntBASIC3.59□□□□□ -1.83
PMS2P54278 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.59□□□□□ -1.83
PMS2P54278 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.59□□□□□ -1.83
PMS2P54278 U6.105-201ENST00000637379 88 ntBASIC3.59□□□□□ -1.83
PMS2P54278 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
PMS2P54278 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
PMS2P54278 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.59□□□□□ -1.84
PMS2P54278 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PMS2P54278 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PMS2P54278 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PMS2P54278 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PMS2P54278 AC002546.1-201ENST00000588041 2504 ntBASIC3.58□□□□□ -1.84
PMS2P54278 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PMS2P54278 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.58□□□□□ -1.84
PMS2P54278 RNU6-1085P-201ENST00000363576 107 ntBASIC3.58□□□□□ -1.84
PMS2P54278 RNU6-867P-201ENST00000364956 107 ntBASIC3.58□□□□□ -1.84
PMS2P54278 RNU6-169P-201ENST00000365336 107 ntBASIC3.58□□□□□ -1.84
PMS2P54278 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
PMS2P54278 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
PMS2P54278 RNA5SP293-201ENST00000410527 113 ntBASIC3.58□□□□□ -1.84
PMS2P54278 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.58□□□□□ -1.84
PMS2P54278 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms