Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 MIR548AB-201ENST00000584917 84 ntBASIC3.01□□□□□ -1.93
LIMK2P53671 AC006504.3-201ENST00000586818 523 ntBASIC3.01□□□□□ -1.93
LIMK2P53671 AC105224.1-201ENST00000587055 421 ntBASIC3.01□□□□□ -1.93
LIMK2P53671 AC073648.5-201ENST00000603502 305 ntBASIC3.01□□□□□ -1.93
LIMK2P53671 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.01□□□□□ -1.93
LIMK2P53671 AC015540.1-201ENST00000615828 501 ntBASIC3.01□□□□□ -1.93
LIMK2P53671 ATP5A1P2-202ENST00000616464 443 ntBASIC3.01□□□□□ -1.93
LIMK2P53671 AC007318.2-201ENST00000620999 243 ntBASIC3.01□□□□□ -1.93
LIMK2P53671 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.01□□□□□ -1.93
LIMK2P53671 MAPK10-266ENST00000641066 6555 ntBASIC3.01□□□□□ -1.93
LIMK2P53671 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
LIMK2P53671 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3□□□□□ -1.93
LIMK2P53671 GABRG2-229ENST00000641017 3628 ntBASIC3□□□□□ -1.93
LIMK2P53671 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
LIMK2P53671 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
LIMK2P53671 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
LIMK2P53671 RNU5F-6P-201ENST00000362979 116 ntBASIC3□□□□□ -1.93
LIMK2P53671 RNU6-7-201ENST00000364784 107 ntBASIC3□□□□□ -1.93
LIMK2P53671 RNU6-8-201ENST00000365467 107 ntBASIC3□□□□□ -1.93
LIMK2P53671 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3□□□□□ -1.93
LIMK2P53671 Y_RNA.510-201ENST00000384511 114 ntBASIC3□□□□□ -1.93
LIMK2P53671 Y_RNA.517-201ENST00000384551 106 ntBASIC3□□□□□ -1.93
LIMK2P53671 MIR1305-201ENST00000408300 86 ntBASIC3□□□□□ -1.93
LIMK2P53671 RN7SKP220-201ENST00000410611 288 ntBASIC3□□□□□ -1.93
LIMK2P53671 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3□□□□□ -1.93
LIMK2P53671 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3□□□□□ -1.93
LIMK2P53671 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3□□□□□ -1.93
LIMK2P53671 UBE2V1P13-201ENST00000436983 439 ntBASIC3□□□□□ -1.93
LIMK2P53671 RSU1P2-202ENST00000437884 485 ntBASIC3□□□□□ -1.93
LIMK2P53671 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3□□□□□ -1.93
LIMK2P53671 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3□□□□□ -1.93
LIMK2P53671 AP000542.1-201ENST00000448473 371 ntBASIC3□□□□□ -1.93
LIMK2P53671 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3□□□□□ -1.93
LIMK2P53671 AC096576.1-201ENST00000489014 359 ntBASIC3□□□□□ -1.93
LIMK2P53671 AC106872.3-201ENST00000495104 446 ntBASIC3□□□□□ -1.93
LIMK2P53671 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3□□□□□ -1.93
LIMK2P53671 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3□□□□□ -1.93
LIMK2P53671 AC022447.3-201ENST00000506865 495 ntBASIC3□□□□□ -1.93
LIMK2P53671 POU5F1P7-201ENST00000508759 541 ntBASIC3□□□□□ -1.93
LIMK2P53671 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3□□□□□ -1.93
LIMK2P53671 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3□□□□□ -1.93
LIMK2P53671 AC109464.2-201ENST00000510242 943 ntBASIC3□□□□□ -1.93
LIMK2P53671 AL359273.1-201ENST00000510918 627 ntBASIC3□□□□□ -1.93
LIMK2P53671 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3□□□□□ -1.93
LIMK2P53671 MTND5P4-201ENST00000514978 288 ntBASIC3□□□□□ -1.93
LIMK2P53671 AC009812.2-201ENST00000517657 457 ntBASIC3□□□□□ -1.93
LIMK2P53671 MTND1P5-201ENST00000517906 940 ntBASIC3□□□□□ -1.93
LIMK2P53671 AC068587.4-201ENST00000533893 186 ntBASIC3□□□□□ -1.93
LIMK2P53671 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3□□□□□ -1.93
LIMK2P53671 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3□□□□□ -1.93
LIMK2P53671 SETP2-201ENST00000553886 926 ntBASIC3□□□□□ -1.93
LIMK2P53671 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3□□□□□ -1.93
LIMK2P53671 AC091489.2-201ENST00000566263 604 ntBASIC3□□□□□ -1.93
LIMK2P53671 AC010546.1-201ENST00000569391 485 ntBASIC3□□□□□ -1.93
LIMK2P53671 AP001094.1-201ENST00000579805 193 ntBASIC3□□□□□ -1.93
LIMK2P53671 MIR4506-201ENST00000584693 77 ntBASIC3□□□□□ -1.93
LIMK2P53671 AC002076.2-201ENST00000617362 122 ntBASIC3□□□□□ -1.93
LIMK2P53671 AC009268.2-201ENST00000621925 457 ntBASIC3□□□□□ -1.93
LIMK2P53671 MIR4275-201ENST00000636486 87 ntBASIC3□□□□□ -1.93
LIMK2P53671 AC005832.2-201ENST00000538921 1430 ntBASIC3□□□□□ -1.93
LIMK2P53671 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3□□□□□ -1.93
LIMK2P53671 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
LIMK2P53671 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LIMK2P53671 CUL1P1-201ENST00000509510 2425 ntBASIC2.99□□□□□ -1.93
LIMK2P53671 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.99□□□□□ -1.93
LIMK2P53671 Y_RNA.3-201ENST00000362331 103 ntBASIC2.99□□□□□ -1.93
LIMK2P53671 RNU6-853P-201ENST00000364306 107 ntBASIC2.99□□□□□ -1.93
LIMK2P53671 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.99□□□□□ -1.93
LIMK2P53671 SNORA54-201ENST00000384281 123 ntBASIC2.99□□□□□ -1.93
LIMK2P53671 RNU6-114P-201ENST00000384704 105 ntBASIC2.99□□□□□ -1.93
LIMK2P53671 MIR493-201ENST00000385254 89 ntBASIC2.99□□□□□ -1.93
LIMK2P53671 U3.20-201ENST00000390909 217 ntBASIC2.99□□□□□ -1.93
LIMK2P53671 MTCYBP36-201ENST00000404146 440 ntBASIC2.99□□□□□ -1.93
LIMK2P53671 MIR1290-201ENST00000408735 78 ntBASIC2.99□□□□□ -1.93
LIMK2P53671 HMGB1P11-201ENST00000413899 637 ntBASIC2.99□□□□□ -1.93
LIMK2P53671 BMS1P22-201ENST00000414726 313 ntBASIC2.99□□□□□ -1.93
LIMK2P53671 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.99□□□□□ -1.93
LIMK2P53671 PPP1R11P2-201ENST00000423543 382 ntBASIC2.99□□□□□ -1.93
LIMK2P53671 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.99□□□□□ -1.93
LIMK2P53671 AC107083.1-201ENST00000439643 279 ntBASIC2.99□□□□□ -1.93
LIMK2P53671 SSXP1-201ENST00000453640 473 ntBASIC2.99□□□□□ -1.93
LIMK2P53671 MTCYBP1-201ENST00000454315 1119 ntBASIC2.99□□□□□ -1.93
LIMK2P53671 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.99□□□□□ -1.93
LIMK2P53671 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.99□□□□□ -1.93
LIMK2P53671 HMGN2P13-201ENST00000476476 274 ntBASIC2.99□□□□□ -1.93
LIMK2P53671 ARL2BPP4-201ENST00000506854 471 ntBASIC2.99□□□□□ -1.93
LIMK2P53671 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.99□□□□□ -1.93
LIMK2P53671 RNA5SP385-201ENST00000515947 110 ntBASIC2.99□□□□□ -1.93
LIMK2P53671 SNORA31.22-201ENST00000517204 135 ntBASIC2.99□□□□□ -1.93
LIMK2P53671 ERHP1-201ENST00000523006 310 ntBASIC2.99□□□□□ -1.93
LIMK2P53671 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LIMK2P53671 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.99□□□□□ -1.93
LIMK2P53671 AC125611.2-201ENST00000551907 647 ntBASIC2.99□□□□□ -1.93
LIMK2P53671 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.99□□□□□ -1.93
LIMK2P53671 AC027807.1-201ENST00000559921 996 ntBASIC2.99□□□□□ -1.93
LIMK2P53671 EIF1P4-201ENST00000572664 335 ntBASIC2.99□□□□□ -1.93
LIMK2P53671 MTND1P15-201ENST00000579262 949 ntBASIC2.99□□□□□ -1.93
LIMK2P53671 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.99□□□□□ -1.93
LIMK2P53671 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.99□□□□□ -1.93
LIMK2P53671 AC083760.1-201ENST00000589621 670 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms