Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
LBX1P52954 RNU6-328P-201ENST00000390887 106 ntBASIC3.18□□□□□ -1.9
LBX1P52954 U3.20-201ENST00000390909 217 ntBASIC3.18□□□□□ -1.9
LBX1P52954 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.18□□□□□ -1.9
LBX1P52954 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.18□□□□□ -1.9
LBX1P52954 RPL17P12-201ENST00000413391 526 ntBASIC3.18□□□□□ -1.9
LBX1P52954 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.18□□□□□ -1.9
LBX1P52954 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.18□□□□□ -1.9
LBX1P52954 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.18□□□□□ -1.9
LBX1P52954 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.18□□□□□ -1.9
LBX1P52954 AL049734.2-201ENST00000441066 616 ntBASIC3.18□□□□□ -1.9
LBX1P52954 MTND1P9-201ENST00000453775 944 ntBASIC3.18□□□□□ -1.9
LBX1P52954 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LBX1P52954 ST13P14-201ENST00000474095 734 ntBASIC3.18□□□□□ -1.9
LBX1P52954 AC116337.2-201ENST00000477662 156 ntBASIC3.18□□□□□ -1.9
LBX1P52954 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
LBX1P52954 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.18□□□□□ -1.9
LBX1P52954 AC117532.1-201ENST00000514638 323 ntBASIC3.18□□□□□ -1.9
LBX1P52954 AC022447.1-201ENST00000515358 464 ntBASIC3.18□□□□□ -1.9
LBX1P52954 SCARNA17.1-201ENST00000516211 143 ntBASIC3.18□□□□□ -1.9
LBX1P52954 SCARNA17.2-201ENST00000516334 143 ntBASIC3.18□□□□□ -1.9
LBX1P52954 AP002748.2-201ENST00000528671 348 ntBASIC3.18□□□□□ -1.9
LBX1P52954 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.18□□□□□ -1.9
LBX1P52954 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.18□□□□□ -1.9
LBX1P52954 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.18□□□□□ -1.9
LBX1P52954 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.18□□□□□ -1.9
LBX1P52954 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.18□□□□□ -1.9
LBX1P52954 AC064872.1-201ENST00000604823 1072 ntBASIC3.18□□□□□ -1.9
LBX1P52954 AC007938.3-201ENST00000604965 623 ntBASIC3.18□□□□□ -1.9
LBX1P52954 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.18□□□□□ -1.9
LBX1P52954 RMST_8.1-201ENST00000610287 165 ntBASIC3.18□□□□□ -1.9
LBX1P52954 AC073114.1-201ENST00000612027 490 ntBASIC3.18□□□□□ -1.9
LBX1P52954 AC104237.2-201ENST00000612456 443 ntBASIC3.18□□□□□ -1.9
LBX1P52954 SCARNA17.4-201ENST00000614296 143 ntBASIC3.18□□□□□ -1.9
LBX1P52954 MIR6130-201ENST00000619419 109 ntBASIC3.18□□□□□ -1.9
LBX1P52954 AL603839.4-201ENST00000624658 1005 ntBASIC3.18□□□□□ -1.9
LBX1P52954 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
LBX1P52954 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
LBX1P52954 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LBX1P52954 FRG1BP-201ENST00000278882 761 ntBASIC3.17□□□□□ -1.9
LBX1P52954 Y_RNA.46-201ENST00000362695 102 ntBASIC3.17□□□□□ -1.9
LBX1P52954 Y_RNA.51-201ENST00000362725 102 ntBASIC3.17□□□□□ -1.9
LBX1P52954 U3.4-201ENST00000363352 213 ntBASIC3.17□□□□□ -1.9
LBX1P52954 RNU6-97P-201ENST00000363387 104 ntBASIC3.17□□□□□ -1.9
LBX1P52954 MIR7-2-201ENST00000384970 110 ntBASIC3.17□□□□□ -1.9
LBX1P52954 AL356057.3-201ENST00000402607 340 ntBASIC3.17□□□□□ -1.9
LBX1P52954 AC078974.1-201ENST00000411597 223 ntBASIC3.17□□□□□ -1.9
LBX1P52954 RPL7P10-201ENST00000417407 739 ntBASIC3.17□□□□□ -1.9
LBX1P52954 AC079780.1-201ENST00000428259 207 ntBASIC3.17□□□□□ -1.9
LBX1P52954 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.17□□□□□ -1.9
LBX1P52954 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.17□□□□□ -1.9
LBX1P52954 MTCO2P16-201ENST00000436962 677 ntBASIC3.17□□□□□ -1.9
LBX1P52954 AL031667.1-201ENST00000440222 725 ntBASIC3.17□□□□□ -1.9
LBX1P52954 PGBD4P3-201ENST00000440731 581 ntBASIC3.17□□□□□ -1.9
LBX1P52954 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.17□□□□□ -1.9
LBX1P52954 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.17□□□□□ -1.9
LBX1P52954 AL162389.1-201ENST00000449233 177 ntBASIC3.17□□□□□ -1.9
LBX1P52954 AC009961.3-201ENST00000449832 765 ntBASIC3.17□□□□□ -1.9
LBX1P52954 CFTRP1-201ENST00000456646 183 ntBASIC3.17□□□□□ -1.9
LBX1P52954 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.17□□□□□ -1.9
LBX1P52954 AC004801.2-202ENST00000463559 283 ntBASIC3.17□□□□□ -1.9
LBX1P52954 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.17□□□□□ -1.9
LBX1P52954 AC116337.1-201ENST00000509680 687 ntBASIC3.17□□□□□ -1.9
LBX1P52954 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.17□□□□□ -1.9
LBX1P52954 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LBX1P52954 RNU6-201P-201ENST00000517100 61 ntBASIC3.17□□□□□ -1.9
LBX1P52954 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.17□□□□□ -1.9
LBX1P52954 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.17□□□□□ -1.9
LBX1P52954 ZNF519P3-201ENST00000557158 1032 ntBASIC3.17□□□□□ -1.9
LBX1P52954 MIR3186-201ENST00000577404 85 ntBASIC3.17□□□□□ -1.9
LBX1P52954 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.17□□□□□ -1.9
LBX1P52954 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.17□□□□□ -1.9
LBX1P52954 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.17□□□□□ -1.9
LBX1P52954 AL360181.4-201ENST00000621752 134 ntBASIC3.17□□□□□ -1.9
LBX1P52954 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
LBX1P52954 MIR7153-201ENST00000637758 57 ntBASIC3.17□□□□□ -1.9
LBX1P52954 CRYM-AS1-204ENST00000637983 556 ntBASIC3.17□□□□□ -1.9
LBX1P52954 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
LBX1P52954 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.17□□□□□ -1.9
LBX1P52954 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.17□□□□□ -1.9
LBX1P52954 AP001350.1-201ENST00000601906 1524 ntBASIC3.16□□□□□ -1.9
LBX1P52954 RNU6-600P-201ENST00000362524 99 ntBASIC3.16□□□□□ -1.9
LBX1P52954 Y_RNA.201-201ENST00000364052 96 ntBASIC3.16□□□□□ -1.9
LBX1P52954 RNU4-24P-201ENST00000364565 139 ntBASIC3.16□□□□□ -1.9
LBX1P52954 RPS20P2-201ENST00000402520 389 ntBASIC3.16□□□□□ -1.9
LBX1P52954 Y_RNA.608-201ENST00000410647 95 ntBASIC3.16□□□□□ -1.9
LBX1P52954 AL137014.1-201ENST00000420490 1226 ntBASIC3.16□□□□□ -1.9
LBX1P52954 BEND7P1-201ENST00000422058 457 ntBASIC3.16□□□□□ -1.9
LBX1P52954 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.16□□□□□ -1.9
LBX1P52954 AC002075.2-201ENST00000425207 252 ntBASIC3.16□□□□□ -1.9
LBX1P52954 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.16□□□□□ -1.9
LBX1P52954 HMGB3P11-201ENST00000440127 604 ntBASIC3.16□□□□□ -1.9
LBX1P52954 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.16□□□□□ -1.9
LBX1P52954 HIGD1AP2-201ENST00000446367 280 ntBASIC3.16□□□□□ -1.9
LBX1P52954 COX6CP12-201ENST00000446748 202 ntBASIC3.16□□□□□ -1.9
LBX1P52954 HMGB3P8-201ENST00000449709 577 ntBASIC3.16□□□□□ -1.9
LBX1P52954 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LBX1P52954 AP1S2P1-201ENST00000457344 379 ntBASIC3.16□□□□□ -1.9
LBX1P52954 MTCO1P42-201ENST00000457379 726 ntBASIC3.16□□□□□ -1.9
LBX1P52954 RNA5SP269-201ENST00000459032 137 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms