Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CLCNKAP51800 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.34□□□□□ -1.87
CLCNKAP51800 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLCNKAP51800 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLCNKAP51800 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLCNKAP51800 Y_RNA.372-201ENST00000365599 102 ntBASIC3.34□□□□□ -1.87
CLCNKAP51800 RNU6-39P-201ENST00000384344 107 ntBASIC3.34□□□□□ -1.87
CLCNKAP51800 RNVU1-14-201ENST00000384770 164 ntBASIC3.34□□□□□ -1.87
CLCNKAP51800 AL136116.1-201ENST00000403591 381 ntBASIC3.34□□□□□ -1.87
CLCNKAP51800 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.34□□□□□ -1.87
CLCNKAP51800 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.34□□□□□ -1.87
CLCNKAP51800 AC073464.1-201ENST00000429823 534 ntBASIC3.34□□□□□ -1.87
CLCNKAP51800 AC093156.1-201ENST00000440382 670 ntBASIC3.34□□□□□ -1.87
CLCNKAP51800 AC132479.1-201ENST00000449160 144 ntBASIC3.34□□□□□ -1.87
CLCNKAP51800 AC006539.3-201ENST00000454258 129 ntBASIC3.34□□□□□ -1.87
CLCNKAP51800 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.34□□□□□ -1.87
CLCNKAP51800 RPL21P8-201ENST00000465083 535 ntBASIC3.34□□□□□ -1.87
CLCNKAP51800 AL049714.1-201ENST00000466686 347 ntBASIC3.34□□□□□ -1.87
CLCNKAP51800 RN7SL807P-201ENST00000470923 297 ntBASIC3.34□□□□□ -1.87
CLCNKAP51800 MLLT10P2-201ENST00000506434 249 ntBASIC3.34□□□□□ -1.87
CLCNKAP51800 KLHL2P1-201ENST00000508691 521 ntBASIC3.34□□□□□ -1.87
CLCNKAP51800 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.34□□□□□ -1.87
CLCNKAP51800 PHBP14-201ENST00000512887 367 ntBASIC3.34□□□□□ -1.87
CLCNKAP51800 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.34□□□□□ -1.87
CLCNKAP51800 SCARNA24.1-201ENST00000516465 137 ntBASIC3.34□□□□□ -1.87
CLCNKAP51800 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CLCNKAP51800 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.34□□□□□ -1.87
CLCNKAP51800 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.34□□□□□ -1.87
CLCNKAP51800 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.34□□□□□ -1.87
CLCNKAP51800 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.34□□□□□ -1.87
CLCNKAP51800 SUB1P2-201ENST00000556401 297 ntBASIC3.34□□□□□ -1.87
CLCNKAP51800 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.34□□□□□ -1.87
CLCNKAP51800 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.34□□□□□ -1.87
CLCNKAP51800 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.34□□□□□ -1.87
CLCNKAP51800 FAM60BP-201ENST00000578364 658 ntBASIC3.34□□□□□ -1.87
CLCNKAP51800 MIR4293-201ENST00000584305 78 ntBASIC3.34□□□□□ -1.87
CLCNKAP51800 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.34□□□□□ -1.87
CLCNKAP51800 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.34□□□□□ -1.87
CLCNKAP51800 AL391646.1-201ENST00000603860 190 ntBASIC3.34□□□□□ -1.87
CLCNKAP51800 AC004067.1-201ENST00000608733 700 ntBASIC3.34□□□□□ -1.87
CLCNKAP51800 AC110801.1-201ENST00000623590 212 ntBASIC3.34□□□□□ -1.87
CLCNKAP51800 CR381653.2-201ENST00000624041 768 ntBASIC3.34□□□□□ -1.87
CLCNKAP51800 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.34□□□□□ -1.87
CLCNKAP51800 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.34□□□□□ -1.87
CLCNKAP51800 MTND5P1-201ENST00000445440 1375 ntBASIC3.34□□□□□ -1.88
CLCNKAP51800 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
CLCNKAP51800 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CLCNKAP51800 AC103988.1-201ENST00000566382 2177 ntBASIC3.34□□□□□ -1.88
CLCNKAP51800 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLCNKAP51800 Z83843.1-201ENST00000604070 3685 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLCNKAP51800 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.33□□□□□ -1.88
CLCNKAP51800 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLCNKAP51800 DDX10P1-201ENST00000448545 1933 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLCNKAP51800 OR4G2P-201ENST00000328113 903 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 Y_RNA.1-201ENST00000352915 104 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 RNA5SP197-201ENST00000363357 119 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 RNU6-511P-201ENST00000363496 107 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLCNKAP51800 RNU6-780P-201ENST00000391030 104 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 MTCO3P40-201ENST00000392516 676 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 CALM2P3-201ENST00000400429 449 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 RNU2-62P-201ENST00000410868 191 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.33□□□□□ -1.88
CLCNKAP51800 PPP1R11P2-201ENST00000423543 382 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 MTCO1P39-201ENST00000426148 480 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 MTCO3P30-201ENST00000426425 670 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.33□□□□□ -1.88
CLCNKAP51800 RPL23AP30-201ENST00000432419 501 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 AC002486.1-201ENST00000435098 391 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.33□□□□□ -1.88
CLCNKAP51800 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.33□□□□□ -1.88
CLCNKAP51800 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.33□□□□□ -1.88
CLCNKAP51800 PSPHP1-201ENST00000450062 261 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 AC126182.1-201ENST00000478134 357 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 AC007182.2-201ENST00000489251 402 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 FCF1P3-201ENST00000496394 590 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 HSPD1P15-201ENST00000505573 1122 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.33□□□□□ -1.88
CLCNKAP51800 AC010493.1-201ENST00000513479 292 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 AC010265.1-201ENST00000513509 211 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 SNORA31.8-201ENST00000516327 108 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 SNORD59.2-201ENST00000516873 68 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 HMGN1P28-201ENST00000521340 364 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.33□□□□□ -1.88
CLCNKAP51800 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.33□□□□□ -1.88
CLCNKAP51800 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.33□□□□□ -1.88
CLCNKAP51800 AC123904.3-201ENST00000547218 814 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 ARL2BPP2-201ENST00000550907 489 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.33□□□□□ -1.88
CLCNKAP51800 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.33□□□□□ -1.88
CLCNKAP51800 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.33□□□□□ -1.88
CLCNKAP51800 MTATP6P3-201ENST00000581686 676 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.33□□□□□ -1.88
CLCNKAP51800 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.33□□□□□ -1.88
CLCNKAP51800 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.33□□□□□ -1.88
CLCNKAP51800 AC004696.1-201ENST00000614345 607 ntBASIC3.33□□□□□ -1.88
CLCNKAP51800 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.33□□□□□ -1.88
CLCNKAP51800 AC073534.2-201ENST00000620377 381 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms