Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 APOOP1-201ENST00000604695 592 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 AC007619.2-201ENST00000605743 379 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 AC006270.3-201ENST00000605967 1036 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2□□□□□ -2.09
HLA-DMAP28067 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2□□□□□ -2.09
HLA-DMAP28067 AC004067.1-201ENST00000608733 700 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 AC018645.2-201ENST00000609151 472 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 AC131235.4-201ENST00000609288 620 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 AC013562.2-201ENST00000611632 603 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
HLA-DMAP28067 AC098657.3-201ENST00000620434 263 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 AL445264.1-201ENST00000621719 171 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 OR1S1-201ENST00000624470 978 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 AL365361.1-201ENST00000566942 3481 ntBASIC2□□□□□ -2.09
HLA-DMAP28067 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
HLA-DMAP28067 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-DMAP28067 RNU6-859P-201ENST00000362728 107 ntBASIC1.99□□□□□ -2.09
HLA-DMAP28067 OR5H15-201ENST00000383696 930 ntBASIC1.99□□□□□ -2.09
HLA-DMAP28067 AL139039.1-201ENST00000401900 692 ntBASIC1.99□□□□□ -2.09
HLA-DMAP28067 ERHP2-201ENST00000402323 299 ntBASIC1.99□□□□□ -2.09
HLA-DMAP28067 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.99□□□□□ -2.09
HLA-DMAP28067 TIMM9P2-201ENST00000419324 266 ntBASIC1.99□□□□□ -2.09
HLA-DMAP28067 PPP1R11P2-201ENST00000423543 382 ntBASIC1.99□□□□□ -2.09
HLA-DMAP28067 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.99□□□□□ -2.09
HLA-DMAP28067 AL451062.2-201ENST00000427515 271 ntBASIC1.99□□□□□ -2.09
HLA-DMAP28067 RPS15AP5-201ENST00000436276 388 ntBASIC1.99□□□□□ -2.09
HLA-DMAP28067 GPM6BP3-201ENST00000442797 145 ntBASIC1.99□□□□□ -2.09
HLA-DMAP28067 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
HLA-DMAP28067 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.99□□□□□ -2.09
HLA-DMAP28067 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-DMAP28067 RPL36AP51-201ENST00000487216 318 ntBASIC1.99□□□□□ -2.09
HLA-DMAP28067 LINC00888-204ENST00000487386 421 ntBASIC1.99□□□□□ -2.09
HLA-DMAP28067 AC105252.1-201ENST00000503089 286 ntBASIC1.99□□□□□ -2.09
HLA-DMAP28067 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.99□□□□□ -2.09
HLA-DMAP28067 AC008413.1-201ENST00000511864 177 ntBASIC1.99□□□□□ -2.09
HLA-DMAP28067 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.99□□□□□ -2.09
HLA-DMAP28067 RNU1-40P-201ENST00000516816 164 ntBASIC1.99□□□□□ -2.09
HLA-DMAP28067 RNU1-97P-201ENST00000516872 164 ntBASIC1.99□□□□□ -2.09
HLA-DMAP28067 RNA5SP291-201ENST00000517222 105 ntBASIC1.99□□□□□ -2.09
HLA-DMAP28067 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.99□□□□□ -2.09
HLA-DMAP28067 AC005951.2-201ENST00000576282 495 ntBASIC1.99□□□□□ -2.09
HLA-DMAP28067 AC025165.5-201ENST00000602802 578 ntBASIC1.99□□□□□ -2.09
HLA-DMAP28067 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC1.99□□□□□ -2.09
HLA-DMAP28067 AC005014.3-201ENST00000605985 190 ntBASIC1.99□□□□□ -2.09
HLA-DMAP28067 AL158211.4-201ENST00000606988 584 ntBASIC1.99□□□□□ -2.09
HLA-DMAP28067 AC093732.2-201ENST00000607950 274 ntBASIC1.99□□□□□ -2.09
HLA-DMAP28067 AC107075.1-201ENST00000613695 314 ntBASIC1.99□□□□□ -2.09
HLA-DMAP28067 AL161423.1-201ENST00000613700 262 ntBASIC1.99□□□□□ -2.09
HLA-DMAP28067 AC002550.2-201ENST00000621246 394 ntBASIC1.99□□□□□ -2.09
HLA-DMAP28067 AC068057.2-201ENST00000624047 895 ntBASIC1.99□□□□□ -2.09
HLA-DMAP28067 AL160394.1-201ENST00000624765 724 ntBASIC1.99□□□□□ -2.09
HLA-DMAP28067 PCNP-208ENST00000627393 136 ntTSL 2 BASIC1.99□□□□□ -2.09
HLA-DMAP28067 AC116618.1-201ENST00000634617 774 ntBASIC1.99□□□□□ -2.09
HLA-DMAP28067 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-DMAP28067 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.99□□□□□ -2.09
HLA-DMAP28067 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
HLA-DMAP28067 Y_RNA.192-201ENST00000363977 102 ntBASIC1.98□□□□□ -2.09
HLA-DMAP28067 RNU6-560P-201ENST00000364007 108 ntBASIC1.98□□□□□ -2.09
HLA-DMAP28067 RNU6-289P-201ENST00000364093 107 ntBASIC1.98□□□□□ -2.09
HLA-DMAP28067 RNU6-777P-201ENST00000364265 104 ntBASIC1.98□□□□□ -2.09
HLA-DMAP28067 RNU1-39P-201ENST00000383897 165 ntBASIC1.98□□□□□ -2.09
HLA-DMAP28067 U3.40-201ENST00000408706 208 ntBASIC1.98□□□□□ -2.09
HLA-DMAP28067 RNU2-40P-201ENST00000410833 196 ntBASIC1.98□□□□□ -2.09
HLA-DMAP28067 ZNF863P-201ENST00000426746 417 ntBASIC1.98□□□□□ -2.09
HLA-DMAP28067 AL358794.1-201ENST00000445689 381 ntBASIC1.98□□□□□ -2.09
HLA-DMAP28067 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DMAP28067 AP000936.2-201ENST00000447151 681 ntBASIC1.98□□□□□ -2.09
HLA-DMAP28067 PSPHP1-201ENST00000450062 261 ntBASIC1.98□□□□□ -2.09
HLA-DMAP28067 AC090515.1-201ENST00000465295 476 ntBASIC1.98□□□□□ -2.09
HLA-DMAP28067 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HLA-DMAP28067 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.98□□□□□ -2.09
HLA-DMAP28067 MTND3P3-201ENST00000505004 126 ntBASIC1.98□□□□□ -2.09
HLA-DMAP28067 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.98□□□□□ -2.09
HLA-DMAP28067 AC034159.1-201ENST00000513885 583 ntBASIC1.98□□□□□ -2.09
HLA-DMAP28067 AC021451.1-201ENST00000523498 1129 ntBASIC1.98□□□□□ -2.09
HLA-DMAP28067 AP003497.1-201ENST00000528472 562 ntBASIC1.98□□□□□ -2.09
HLA-DMAP28067 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.98□□□□□ -2.09
HLA-DMAP28067 AC010186.2-204ENST00000537668 439 ntBASIC1.98□□□□□ -2.09
HLA-DMAP28067 AL132857.1-201ENST00000555180 708 ntBASIC1.98□□□□□ -2.09
HLA-DMAP28067 CYCSP2-201ENST00000558168 301 ntBASIC1.98□□□□□ -2.09
HLA-DMAP28067 AC090615.1-201ENST00000577519 154 ntBASIC1.98□□□□□ -2.09
HLA-DMAP28067 MIR4325-201ENST00000583049 90 ntBASIC1.98□□□□□ -2.09
HLA-DMAP28067 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.98□□□□□ -2.09
HLA-DMAP28067 AC007179.3-201ENST00000604976 235 ntBASIC1.98□□□□□ -2.09
HLA-DMAP28067 AC096577.2-201ENST00000611455 153 ntBASIC1.98□□□□□ -2.09
HLA-DMAP28067 AL603758.1-201ENST00000618654 241 ntBASIC1.98□□□□□ -2.09
HLA-DMAP28067 AL031601.2-202ENST00000622650 282 ntBASIC1.98□□□□□ -2.09
HLA-DMAP28067 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.98□□□□□ -2.09
HLA-DMAP28067 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.98□□□□□ -2.09
HLA-DMAP28067 AL356473.1-201ENST00000406203 1408 ntBASIC1.98□□□□□ -2.09
HLA-DMAP28067 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HLA-DMAP28067 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
HLA-DMAP28067 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-DMAP28067 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-DMAP28067 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-DMAP28067 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
HLA-DMAP28067 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-DMAP28067 RNU6-413P-201ENST00000384115 107 ntBASIC1.97□□□□□ -2.09
HLA-DMAP28067 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
HLA-DMAP28067 MIR888-201ENST00000401186 77 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms