| PTPN2 | P17706 | BDH2P1-201 | ENST00000602288 | 736 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC080078.2-201 | ENST00000603766 | 501 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | TTTY3B-201 | ENST00000631331 | 344 nt | TSL 1 (best) BASIC | 3.55 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC009812.4-201 | ENST00000569134 | 1805 nt | BASIC | 3.55 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | HELZ-201 | ENST00000358691 | 13810 nt | TSL 1 (best) BASIC | 3.55 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AL050331.3-201 | ENST00000448740 | 2081 nt | TSL 2 BASIC | 3.55 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | METTL18-201 | ENST00000303469 | 1426 nt | APPRIS P1 TSL 1 (best) BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | ZNF266-204 | ENST00000590306 | 3317 nt | APPRIS P1 TSL 1 (best) BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | ERBIN-201 | ENST00000284037 | 8647 nt | TSL 1 (best) BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | TBC1D31-214 | ENST00000522420 | 3167 nt | TSL 1 (best) BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | PLOD2-204 | ENST00000461497 | 3043 nt | TSL 2 BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | ATXN3-248 | ENST00000558190 | 26812 nt | APPRIS P1 TSL 1 (best) BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | RNU6-223P-201 | ENST00000362830 | 107 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | RNY1P12-201 | ENST00000364251 | 105 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | CRLS1-202 | ENST00000378868 | 994 nt | TSL 5 BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | RNU1-39P-201 | ENST00000383897 | 165 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | Y_RNA.516-201 | ENST00000384541 | 124 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | Y_RNA.599-201 | ENST00000410489 | 109 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | RPS27L-202 | ENST00000411926 | 528 nt | TSL 3 BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | PIGFP2-201 | ENST00000421400 | 651 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | NBDY-202 | ENST00000423617 | 543 nt | APPRIS P1 TSL 2 BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC007271.1-201 | ENST00000428188 | 382 nt | TSL 3 BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | LINC02095-201 | ENST00000430908 | 346 nt | TSL 2 BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | FCF1P1-201 | ENST00000432690 | 571 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC005019.2-201 | ENST00000434321 | 359 nt | TSL 5 BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AL451074.3-201 | ENST00000437709 | 472 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AL359706.1-201 | ENST00000437748 | 315 nt | TSL 3 BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC005094.1-201 | ENST00000440420 | 368 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | RPL26P6-201 | ENST00000440913 | 438 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | DPP10-AS2-201 | ENST00000446992 | 624 nt | TSL 5 BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | MRPS31P2-201 | ENST00000451581 | 518 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC008481.1-201 | ENST00000463278 | 396 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | HMGN2P13-201 | ENST00000476476 | 274 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC108860.1-201 | ENST00000484521 | 383 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | RN7SL504P-201 | ENST00000494496 | 287 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | KCTD9P5-201 | ENST00000504141 | 1170 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC097460.1-201 | ENST00000514624 | 590 nt | TSL 3 BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC010280.1-201 | ENST00000515199 | 340 nt | TSL 2 BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | RNU6-390P-201 | ENST00000516259 | 103 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | SNORA31.22-201 | ENST00000517204 | 135 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | RNU6-840P-201 | ENST00000517275 | 65 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC022616.3-201 | ENST00000523940 | 148 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC022690.1-201 | ENST00000526681 | 550 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC022240.1-201 | ENST00000532065 | 684 nt | TSL 1 (best) BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC087883.1-201 | ENST00000551882 | 391 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC010547.2-201 | ENST00000568523 | 409 nt | TSL 5 BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AP005530.1-201 | ENST00000572608 | 567 nt | TSL 3 BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | MIR5004-201 | ENST00000579078 | 107 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AL162713.1-201 | ENST00000604480 | 262 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AL136363.1-201 | ENST00000605349 | 337 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC008962.1-201 | ENST00000605729 | 304 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AL021997.1-201 | ENST00000605757 | 193 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | SMAD5-AS1_2.1-201 | ENST00000617906 | 131 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC026585.1-201 | ENST00000619582 | 524 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | THOC1-220 | ENST00000621904 | 1083 nt | TSL 5 BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC099654.12-201 | ENST00000639868 | 649 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | NAIP-205 | ENST00000508426 | 4153 nt | TSL 1 (best) BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC027514.1-201 | ENST00000588561 | 1603 nt | BASIC | 3.54 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | ZNF807-201 | ENST00000328088 | 1707 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | RAB3C-201 | ENST00000282878 | 8896 nt | APPRIS P1 TSL 1 (best) BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC068647.1-201 | ENST00000489539 | 2265 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | RNU6-282P-201 | ENST00000365357 | 103 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | LGI1-201 | ENST00000371413 | 1247 nt | TSL 1 (best) BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AL136372.1-201 | ENST00000403060 | 228 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AL391417.1-201 | ENST00000404100 | 426 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | FAT1P1-201 | ENST00000406588 | 507 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | NT5C3A-205 | ENST00000409467 | 1032 nt | APPRIS ALT1 TSL 5 BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | RNU4-47P-201 | ENST00000410876 | 114 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | MTND3P17-201 | ENST00000416968 | 344 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AL355989.1-202 | ENST00000419406 | 408 nt | TSL 3 BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC069257.1-202 | ENST00000425275 | 422 nt | TSL 3 BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AL122017.1-201 | ENST00000435858 | 784 nt | TSL 2 BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC112518.1-201 | ENST00000436089 | 575 nt | TSL 4 BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC012445.1-201 | ENST00000442831 | 607 nt | TSL 3 BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AL136380.1-201 | ENST00000447970 | 162 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | C1DP4-201 | ENST00000455429 | 424 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AL359385.1-201 | ENST00000456509 | 365 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | GRM7-AS3-209 | ENST00000458713 | 454 nt | TSL 3 BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC004924.1-201 | ENST00000480160 | 781 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | RPL9P33-201 | ENST00000484311 | 566 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | PLS1-AS1-201 | ENST00000485338 | 346 nt | TSL 3 BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | ATP6V1G3-204 | ENST00000489986 | 449 nt | TSL 1 (best) BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | SUB1-206 | ENST00000506237 | 908 nt | APPRIS P1 TSL 2 BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC108727.1-201 | ENST00000513802 | 393 nt | TSL 2 BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | FAM60DP-201 | ENST00000524174 | 632 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | RGS5-206 | ENST00000527988 | 373 nt | TSL 1 (best) BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC016957.1-201 | ENST00000534895 | 309 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC022509.2-201 | ENST00000540392 | 699 nt | TSL 3 BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC126407.1-201 | ENST00000563044 | 566 nt | TSL 4 BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC026771.1-201 | ENST00000564672 | 415 nt | TSL 2 BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | BLOC1S6-206 | ENST00000564765 | 706 nt | TSL 4 BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AF001550.1-201 | ENST00000572747 | 573 nt | TSL 4 BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | MIR4738-201 | ENST00000579134 | 87 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC098848.1-201 | ENST00000588466 | 567 nt | TSL 4 BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AL157786.1-204 | ENST00000594870 | 506 nt | TSL 3 BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | LINC01515-204 | ENST00000595269 | 402 nt | TSL 5 BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AP002826.1-201 | ENST00000608835 | 315 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC135507.2-201 | ENST00000612443 | 309 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AC136475.10-201 | ENST00000620253 | 385 nt | BASIC | 3.53 | □□□□□ -1.84 | | |
| PTPN2 | P17706 | AL353651.2-201 | ENST00000635706 | 559 nt | TSL 5 BASIC | 3.53 | □□□□□ -1.84 | | |