Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC121334.2-201ENST00000605387 271 ntBASIC3.09□□□□□ -1.91
VTNP04004 HULC.1-201ENST00000612720 240 ntBASIC3.09□□□□□ -1.91
VTNP04004 AC008498.1-201ENST00000613012 531 ntBASIC3.09□□□□□ -1.91
VTNP04004 AL110115.1-201ENST00000614396 364 ntBASIC3.09□□□□□ -1.91
VTNP04004 AC009159.1-201ENST00000618386 642 ntBASIC3.09□□□□□ -1.91
VTNP04004 AC012150.2-201ENST00000621300 544 ntBASIC3.09□□□□□ -1.91
VTNP04004 AL136164.4-201ENST00000625013 2135 ntBASIC3.09□□□□□ -1.91
VTNP04004 AL159972.1-201ENST00000625150 448 ntBASIC3.09□□□□□ -1.91
VTNP04004 AC110994.2-201ENST00000635481 492 ntBASIC3.09□□□□□ -1.91
VTNP04004 U6.98-201ENST00000637157 84 ntBASIC3.09□□□□□ -1.91
VTNP04004 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
VTNP04004 AC092104.1-201ENST00000497346 1441 ntBASIC3.09□□□□□ -1.92
VTNP04004 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
VTNP04004 AL136360.1-201ENST00000503377 1900 ntBASIC3.09□□□□□ -1.92
VTNP04004 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VTNP04004 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VTNP04004 FTLP6-201ENST00000355274 422 ntBASIC3.08□□□□□ -1.92
VTNP04004 MIR449A-201ENST00000362113 91 ntBASIC3.08□□□□□ -1.92
VTNP04004 RNU1-35P-201ENST00000362782 153 ntBASIC3.08□□□□□ -1.92
VTNP04004 RNU4-75P-201ENST00000364621 146 ntBASIC3.08□□□□□ -1.92
VTNP04004 RNY4P34-201ENST00000364779 95 ntBASIC3.08□□□□□ -1.92
VTNP04004 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
VTNP04004 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
VTNP04004 OR5H15-201ENST00000383696 930 ntBASIC3.08□□□□□ -1.92
VTNP04004 RNU6-637P-201ENST00000384050 107 ntBASIC3.08□□□□□ -1.92
VTNP04004 RNU6-328P-201ENST00000390887 106 ntBASIC3.08□□□□□ -1.92
VTNP04004 DEFB108C-201ENST00000400154 252 ntBASIC3.08□□□□□ -1.92
VTNP04004 AL138827.1-201ENST00000402666 306 ntBASIC3.08□□□□□ -1.92
VTNP04004 AL136372.1-201ENST00000403060 228 ntBASIC3.08□□□□□ -1.92
VTNP04004 AL591034.1-201ENST00000407447 340 ntBASIC3.08□□□□□ -1.92
VTNP04004 AC007390.1-201ENST00000415722 356 ntBASIC3.08□□□□□ -1.92
VTNP04004 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.08□□□□□ -1.92
VTNP04004 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.08□□□□□ -1.92
VTNP04004 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.08□□□□□ -1.92
VTNP04004 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.08□□□□□ -1.92
VTNP04004 FTH1P1-201ENST00000437933 532 ntBASIC3.08□□□□□ -1.92
VTNP04004 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.08□□□□□ -1.92
VTNP04004 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.08□□□□□ -1.92
VTNP04004 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.08□□□□□ -1.92
VTNP04004 AL022238.1-201ENST00000442557 355 ntBASIC3.08□□□□□ -1.92
VTNP04004 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.08□□□□□ -1.92
VTNP04004 TPT1P14-201ENST00000448018 505 ntBASIC3.08□□□□□ -1.92
VTNP04004 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.08□□□□□ -1.92
VTNP04004 MTCO2P18-201ENST00000457151 658 ntBASIC3.08□□□□□ -1.92
VTNP04004 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.08□□□□□ -1.92
VTNP04004 RPS23P3-201ENST00000470993 430 ntBASIC3.08□□□□□ -1.92
VTNP04004 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.08□□□□□ -1.92
VTNP04004 AC055855.1-201ENST00000489563 579 ntBASIC3.08□□□□□ -1.92
VTNP04004 KCTD9P5-201ENST00000504141 1170 ntBASIC3.08□□□□□ -1.92
VTNP04004 AC091435.1-201ENST00000505442 584 ntBASIC3.08□□□□□ -1.92
VTNP04004 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
VTNP04004 ARL2BPP4-201ENST00000506854 471 ntBASIC3.08□□□□□ -1.92
VTNP04004 CBX3P3-201ENST00000508108 532 ntBASIC3.08□□□□□ -1.92
VTNP04004 MTCO3P7-201ENST00000510008 774 ntBASIC3.08□□□□□ -1.92
VTNP04004 AC079140.3-201ENST00000511111 550 ntBASIC3.08□□□□□ -1.92
VTNP04004 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VTNP04004 RN7SKP43-201ENST00000516173 320 ntBASIC3.08□□□□□ -1.92
VTNP04004 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.08□□□□□ -1.92
VTNP04004 AC068657.1-201ENST00000520807 306 ntBASIC3.08□□□□□ -1.92
VTNP04004 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.08□□□□□ -1.92
VTNP04004 RPL21P5-201ENST00000554662 472 ntBASIC3.08□□□□□ -1.92
VTNP04004 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.08□□□□□ -1.92
VTNP04004 MED28P6-201ENST00000558776 231 ntBASIC3.08□□□□□ -1.92
VTNP04004 AL356432.3-201ENST00000568952 465 ntBASIC3.08□□□□□ -1.92
VTNP04004 AC006566.1-201ENST00000608943 513 ntBASIC3.08□□□□□ -1.92
VTNP04004 AL391813.2-201ENST00000609113 322 ntBASIC3.08□□□□□ -1.92
VTNP04004 AL355472.4-201ENST00000610233 626 ntBASIC3.08□□□□□ -1.92
VTNP04004 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VTNP04004 AL390240.1-201ENST00000612950 384 ntBASIC3.08□□□□□ -1.92
VTNP04004 AC006111.3-201ENST00000622137 383 ntBASIC3.08□□□□□ -1.92
VTNP04004 AL603839.4-201ENST00000624658 1005 ntBASIC3.08□□□□□ -1.92
VTNP04004 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.08□□□□□ -1.92
VTNP04004 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
VTNP04004 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.08□□□□□ -1.92
VTNP04004 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VTNP04004 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VTNP04004 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.08□□□□□ -1.92
VTNP04004 AC092593.1-201ENST00000515413 1815 ntBASIC3.07□□□□□ -1.92
VTNP04004 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VTNP04004 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.07□□□□□ -1.92
VTNP04004 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
VTNP04004 RNU6-432P-201ENST00000384196 109 ntBASIC3.07□□□□□ -1.92
VTNP04004 MIR512-1-201ENST00000384913 84 ntBASIC3.07□□□□□ -1.92
VTNP04004 SNORA48.8-201ENST00000391324 134 ntBASIC3.07□□□□□ -1.92
VTNP04004 AL360182.1-201ENST00000397433 468 ntBASIC3.07□□□□□ -1.92
VTNP04004 EI24P2-201ENST00000397776 1076 ntBASIC3.07□□□□□ -1.92
VTNP04004 RPS3AP36-201ENST00000398190 775 ntBASIC3.07□□□□□ -1.92
VTNP04004 MRPL42P2-201ENST00000403169 426 ntBASIC3.07□□□□□ -1.92
VTNP04004 RNU2-43P-201ENST00000410306 190 ntBASIC3.07□□□□□ -1.92
VTNP04004 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.07□□□□□ -1.92
VTNP04004 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.07□□□□□ -1.92
VTNP04004 UBE2D3P2-201ENST00000424409 445 ntBASIC3.07□□□□□ -1.92
VTNP04004 AC063976.3-201ENST00000426849 329 ntBASIC3.07□□□□□ -1.92
VTNP04004 OR2AS1P-201ENST00000427827 319 ntBASIC3.07□□□□□ -1.92
VTNP04004 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
VTNP04004 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.07□□□□□ -1.92
VTNP04004 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.07□□□□□ -1.92
VTNP04004 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.07□□□□□ -1.92
VTNP04004 RN7SL75P-201ENST00000461926 281 ntBASIC3.07□□□□□ -1.92
VTNP04004 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms