Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CPNE3O75131 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CPNE3O75131 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CPNE3O75131 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CPNE3O75131 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CPNE3O75131 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CPNE3O75131 AC007685.1-201ENST00000329806 452 ntBASIC4.82□□□□□ -1.64
CPNE3O75131 RPL21P1-201ENST00000399532 476 ntBASIC4.82□□□□□ -1.64
CPNE3O75131 MIR1271-201ENST00000408537 86 ntBASIC4.82□□□□□ -1.64
CPNE3O75131 AC009310.1-201ENST00000414414 451 ntBASIC4.82□□□□□ -1.64
CPNE3O75131 AL627311.1-201ENST00000431514 115 ntBASIC4.82□□□□□ -1.64
CPNE3O75131 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.82□□□□□ -1.64
CPNE3O75131 AC073910.1-201ENST00000445047 438 ntBASIC4.82□□□□□ -1.64
CPNE3O75131 RPS3AP46-201ENST00000448352 682 ntBASIC4.82□□□□□ -1.64
CPNE3O75131 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.82□□□□□ -1.64
CPNE3O75131 AC133473.1-201ENST00000455173 299 ntBASIC4.82□□□□□ -1.64
CPNE3O75131 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.82□□□□□ -1.64
CPNE3O75131 NDUFB4P9-201ENST00000511646 388 ntBASIC4.82□□□□□ -1.64
CPNE3O75131 RNA5SP43-201ENST00000516559 110 ntBASIC4.82□□□□□ -1.64
CPNE3O75131 AC144568.1-201ENST00000520139 137 ntBASIC4.82□□□□□ -1.64
CPNE3O75131 AC025755.1-201ENST00000521306 278 ntBASIC4.82□□□□□ -1.64
CPNE3O75131 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.82□□□□□ -1.64
CPNE3O75131 HMGB1P14-201ENST00000557424 591 ntBASIC4.82□□□□□ -1.64
CPNE3O75131 AC040958.1-201ENST00000561102 201 ntBASIC4.82□□□□□ -1.64
CPNE3O75131 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.82□□□□□ -1.64
CPNE3O75131 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.82□□□□□ -1.64
CPNE3O75131 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.82□□□□□ -1.64
CPNE3O75131 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.82□□□□□ -1.64
CPNE3O75131 VN1R91P-201ENST00000594377 169 ntBASIC4.82□□□□□ -1.64
CPNE3O75131 AC138627.2-201ENST00000624202 601 ntBASIC4.82□□□□□ -1.64
CPNE3O75131 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.82□□□□□ -1.64
CPNE3O75131 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.82□□□□□ -1.64
CPNE3O75131 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CPNE3O75131 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CPNE3O75131 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CPNE3O75131 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CPNE3O75131 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CPNE3O75131 ZNF299P-201ENST00000406845 1804 ntBASIC4.81□□□□□ -1.64
CPNE3O75131 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CPNE3O75131 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.81□□□□□ -1.64
CPNE3O75131 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CPNE3O75131 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CPNE3O75131 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CPNE3O75131 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CPNE3O75131 Y_RNA.489-201ENST00000384410 101 ntBASIC4.81□□□□□ -1.64
CPNE3O75131 MIR10A-201ENST00000385043 110 ntBASIC4.81□□□□□ -1.64
CPNE3O75131 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CPNE3O75131 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CPNE3O75131 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.81□□□□□ -1.64
CPNE3O75131 COX5BP7-201ENST00000414780 274 ntBASIC4.81□□□□□ -1.64
CPNE3O75131 AC087650.1-201ENST00000431445 468 ntBASIC4.81□□□□□ -1.64
CPNE3O75131 OR1H1P-201ENST00000448731 937 ntBASIC4.81□□□□□ -1.64
CPNE3O75131 RPS29P22-201ENST00000472363 168 ntBASIC4.81□□□□□ -1.64
CPNE3O75131 RPL23AP45-201ENST00000476406 468 ntBASIC4.81□□□□□ -1.64
CPNE3O75131 RN7SL319P-201ENST00000480656 221 ntBASIC4.81□□□□□ -1.64
CPNE3O75131 RNU6-388P-201ENST00000517012 105 ntBASIC4.81□□□□□ -1.64
CPNE3O75131 RNU6-389P-201ENST00000517048 105 ntBASIC4.81□□□□□ -1.64
CPNE3O75131 RNA5SP291-201ENST00000517222 105 ntBASIC4.81□□□□□ -1.64
CPNE3O75131 MTND4LP5-201ENST00000605152 292 ntBASIC4.81□□□□□ -1.64
CPNE3O75131 AP005432.2-201ENST00000608162 586 ntBASIC4.81□□□□□ -1.64
CPNE3O75131 MIR6748-201ENST00000610433 71 ntBASIC4.81□□□□□ -1.64
CPNE3O75131 AC090132.2-201ENST00000615881 347 ntBASIC4.81□□□□□ -1.64
CPNE3O75131 MIR6839-201ENST00000620425 113 ntBASIC4.81□□□□□ -1.64
CPNE3O75131 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CPNE3O75131 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CPNE3O75131 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.81□□□□□ -1.64
CPNE3O75131 AP000542.2-201ENST00000623199 6179 ntBASIC4.81□□□□□ -1.64
CPNE3O75131 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CPNE3O75131 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CPNE3O75131 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.8□□□□□ -1.64
CPNE3O75131 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CPNE3O75131 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.8□□□□□ -1.64
CPNE3O75131 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CPNE3O75131 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CPNE3O75131 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CPNE3O75131 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CPNE3O75131 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CPNE3O75131 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CPNE3O75131 Y_RNA.288-201ENST00000364854 92 ntBASIC4.8□□□□□ -1.64
CPNE3O75131 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CPNE3O75131 RNA5SP87-201ENST00000384155 118 ntBASIC4.8□□□□□ -1.64
CPNE3O75131 Y_RNA.526-201ENST00000384572 110 ntBASIC4.8□□□□□ -1.64
CPNE3O75131 AP000580.1-201ENST00000404439 358 ntBASIC4.8□□□□□ -1.64
CPNE3O75131 U3.42-201ENST00000408746 214 ntBASIC4.8□□□□□ -1.64
CPNE3O75131 RNU2-33P-201ENST00000410344 192 ntBASIC4.8□□□□□ -1.64
CPNE3O75131 RN7SKP216-201ENST00000411050 312 ntBASIC4.8□□□□□ -1.64
CPNE3O75131 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.8□□□□□ -1.64
CPNE3O75131 AC092423.1-201ENST00000430165 186 ntBASIC4.8□□□□□ -1.64
CPNE3O75131 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.8□□□□□ -1.64
CPNE3O75131 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.8□□□□□ -1.64
CPNE3O75131 AC112498.1-201ENST00000444401 332 ntBASIC4.8□□□□□ -1.64
CPNE3O75131 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.8□□□□□ -1.64
CPNE3O75131 AP005902.1-201ENST00000521358 186 ntBASIC4.8□□□□□ -1.64
CPNE3O75131 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.8□□□□□ -1.64
CPNE3O75131 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.8□□□□□ -1.64
CPNE3O75131 RN7SL435P-201ENST00000584418 282 ntBASIC4.8□□□□□ -1.64
CPNE3O75131 AC008121.1-201ENST00000603244 268 ntBASIC4.8□□□□□ -1.64
CPNE3O75131 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CPNE3O75131 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CPNE3O75131 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms