Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 RNA5SP274-201ENST00000410484 108 ntBASIC2.71□□□□□ -1.98
CDX4O14627 RN7SKP142-201ENST00000411236 328 ntBASIC2.71□□□□□ -1.98
CDX4O14627 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.71□□□□□ -1.98
CDX4O14627 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CDX4O14627 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.71□□□□□ -1.98
CDX4O14627 RPS15AP6-201ENST00000420703 385 ntBASIC2.71□□□□□ -1.98
CDX4O14627 CYCSP46-201ENST00000423569 204 ntBASIC2.71□□□□□ -1.98
CDX4O14627 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.71□□□□□ -1.98
CDX4O14627 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.71□□□□□ -1.98
CDX4O14627 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.71□□□□□ -1.98
CDX4O14627 AC006539.3-201ENST00000454258 129 ntBASIC2.71□□□□□ -1.98
CDX4O14627 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.71□□□□□ -1.98
CDX4O14627 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.71□□□□□ -1.98
CDX4O14627 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.71□□□□□ -1.98
CDX4O14627 AC117522.3-201ENST00000507974 584 ntBASIC2.71□□□□□ -1.98
CDX4O14627 SNORA31.8-201ENST00000516327 108 ntBASIC2.71□□□□□ -1.98
CDX4O14627 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.71□□□□□ -1.98
CDX4O14627 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CDX4O14627 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.71□□□□□ -1.98
CDX4O14627 AL391156.1-201ENST00000554965 554 ntBASIC2.71□□□□□ -1.98
CDX4O14627 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.71□□□□□ -1.98
CDX4O14627 AC027176.1-201ENST00000560204 514 ntBASIC2.71□□□□□ -1.98
CDX4O14627 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.71□□□□□ -1.98
CDX4O14627 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.71□□□□□ -1.98
CDX4O14627 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.71□□□□□ -1.98
CDX4O14627 AC008507.1-201ENST00000587506 734 ntBASIC2.71□□□□□ -1.98
CDX4O14627 BNIP3P23-201ENST00000599655 511 ntBASIC2.71□□□□□ -1.98
CDX4O14627 AC098826.3-201ENST00000603823 466 ntBASIC2.71□□□□□ -1.98
CDX4O14627 AP001330.4-201ENST00000604350 154 ntBASIC2.71□□□□□ -1.98
CDX4O14627 AC092354.1-201ENST00000606057 376 ntBASIC2.71□□□□□ -1.98
CDX4O14627 AC107214.2-201ENST00000608204 634 ntBASIC2.71□□□□□ -1.98
CDX4O14627 AP000254.1-201ENST00000609934 520 ntBASIC2.71□□□□□ -1.98
CDX4O14627 AC013562.2-201ENST00000611632 603 ntBASIC2.71□□□□□ -1.98
CDX4O14627 AL110115.1-201ENST00000614396 364 ntBASIC2.71□□□□□ -1.98
CDX4O14627 MIR7844-201ENST00000616161 122 ntBASIC2.71□□□□□ -1.98
CDX4O14627 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.71□□□□□ -1.98
CDX4O14627 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.71□□□□□ -1.98
CDX4O14627 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CDX4O14627 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.7□□□□□ -1.98
CDX4O14627 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CDX4O14627 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CDX4O14627 RNY4P24-201ENST00000362735 96 ntBASIC2.7□□□□□ -1.98
CDX4O14627 RNU6-777P-201ENST00000364265 104 ntBASIC2.7□□□□□ -1.98
CDX4O14627 RNU6-853P-201ENST00000364306 107 ntBASIC2.7□□□□□ -1.98
CDX4O14627 RNU6-1078P-201ENST00000364522 103 ntBASIC2.7□□□□□ -1.98
CDX4O14627 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CDX4O14627 Y_RNA.559-201ENST00000384686 107 ntBASIC2.7□□□□□ -1.98
CDX4O14627 MIR135A2-201ENST00000384854 100 ntBASIC2.7□□□□□ -1.98
CDX4O14627 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CDX4O14627 U3.20-201ENST00000390909 217 ntBASIC2.7□□□□□ -1.98
CDX4O14627 AL136372.1-201ENST00000403060 228 ntBASIC2.7□□□□□ -1.98
CDX4O14627 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.7□□□□□ -1.98
CDX4O14627 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.7□□□□□ -1.98
CDX4O14627 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.7□□□□□ -1.98
CDX4O14627 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CDX4O14627 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.7□□□□□ -1.98
CDX4O14627 LSM1P1-201ENST00000438629 273 ntBASIC2.7□□□□□ -1.98
CDX4O14627 AL512286.1-201ENST00000439244 400 ntBASIC2.7□□□□□ -1.98
CDX4O14627 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.7□□□□□ -1.98
CDX4O14627 AP000542.1-201ENST00000448473 371 ntBASIC2.7□□□□□ -1.98
CDX4O14627 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.7□□□□□ -1.98
CDX4O14627 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.7□□□□□ -1.98
CDX4O14627 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.7□□□□□ -1.98
CDX4O14627 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.7□□□□□ -1.98
CDX4O14627 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.7□□□□□ -1.98
CDX4O14627 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.7□□□□□ -1.98
CDX4O14627 AC096725.1-201ENST00000514266 313 ntBASIC2.7□□□□□ -1.98
CDX4O14627 AC022447.1-201ENST00000515358 464 ntBASIC2.7□□□□□ -1.98
CDX4O14627 RNA5SP217-201ENST00000515959 91 ntBASIC2.7□□□□□ -1.98
CDX4O14627 SNORA31.21-201ENST00000517180 77 ntBASIC2.7□□□□□ -1.98
CDX4O14627 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.7□□□□□ -1.98
CDX4O14627 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.7□□□□□ -1.98
CDX4O14627 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.7□□□□□ -1.98
CDX4O14627 IGHV3-76-201ENST00000522465 295 ntBASIC2.7□□□□□ -1.98
CDX4O14627 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CDX4O14627 FAM60DP-201ENST00000524174 632 ntBASIC2.7□□□□□ -1.98
CDX4O14627 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.7□□□□□ -1.98
CDX4O14627 AP004247.1-201ENST00000531556 1289 ntBASIC2.7□□□□□ -1.98
CDX4O14627 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.7□□□□□ -1.98
CDX4O14627 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.7□□□□□ -1.98
CDX4O14627 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.7□□□□□ -1.98
CDX4O14627 COX6CP3-201ENST00000580869 223 ntBASIC2.7□□□□□ -1.98
CDX4O14627 AP001004.1-201ENST00000582468 324 ntBASIC2.7□□□□□ -1.98
CDX4O14627 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.7□□□□□ -1.98
CDX4O14627 AL158827.2-201ENST00000602494 330 ntBASIC2.7□□□□□ -1.98
CDX4O14627 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.7□□□□□ -1.98
CDX4O14627 AC068831.7-201ENST00000616954 363 ntBASIC2.7□□□□□ -1.98
CDX4O14627 AC009878.1-201ENST00000621819 340 ntBASIC2.7□□□□□ -1.98
CDX4O14627 AC092656.1-203ENST00000624134 423 ntBASIC2.7□□□□□ -1.98
CDX4O14627 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.7□□□□□ -1.98
CDX4O14627 AL691447.3-201ENST00000635020 330 ntBASIC2.7□□□□□ -1.98
CDX4O14627 AC006927.3-201ENST00000638789 384 ntBASIC2.7□□□□□ -1.98
CDX4O14627 PABPC1P9-201ENST00000426076 1612 ntBASIC2.7□□□□□ -1.98
CDX4O14627 MTND4P16-201ENST00000466108 1367 ntBASIC2.7□□□□□ -1.98
CDX4O14627 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CDX4O14627 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CDX4O14627 AC092326.2-201ENST00000624772 1561 ntBASIC2.7□□□□□ -1.98
CDX4O14627 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.69□□□□□ -1.98
CDX4O14627 AC005832.2-201ENST00000538921 1430 ntBASIC2.69□□□□□ -1.98
CDX4O14627 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms