Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AC006499.2-201ENST00000513470 337 ntBASIC0.88□□□□□ -2.27
COL6A5A8TX70 IGLVVI-22-1-201ENST00000521183 211 ntBASIC0.88□□□□□ -2.27
COL6A5A8TX70 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC0.88□□□□□ -2.27
COL6A5A8TX70 SYF2P1-201ENST00000550658 413 ntBASIC0.88□□□□□ -2.27
COL6A5A8TX70 AC090897.2-201ENST00000581715 130 ntBASIC0.88□□□□□ -2.27
COL6A5A8TX70 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC0.88□□□□□ -2.27
COL6A5A8TX70 AK6-205ENST00000618980 483 ntTSL 2 BASIC0.88□□□□□ -2.27
COL6A5A8TX70 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.88□□□□□ -2.27
COL6A5A8TX70 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC0.88□□□□□ -2.27
COL6A5A8TX70 AC106901.1-201ENST00000425086 698 ntBASIC0.88□□□□□ -2.27
COL6A5A8TX70 IGLVI-20-201ENST00000519296 130 ntBASIC0.88□□□□□ -2.27
COL6A5A8TX70 AC025755.1-201ENST00000521306 278 ntBASIC0.88□□□□□ -2.27
COL6A5A8TX70 OR4R1P-201ENST00000529879 463 ntBASIC0.88□□□□□ -2.27
COL6A5A8TX70 ANP32BP3-201ENST00000559213 706 ntBASIC0.88□□□□□ -2.27
COL6A5A8TX70 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC0.88□□□□□ -2.27
COL6A5A8TX70 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC0.88□□□□□ -2.27
COL6A5A8TX70 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
COL6A5A8TX70 AL359851.1-201ENST00000569460 4997 ntBASIC0.88□□□□□ -2.27
COL6A5A8TX70 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
COL6A5A8TX70 AC008163.1-202ENST00000636004 2889 ntBASIC0.87□□□□□ -2.27
COL6A5A8TX70 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.87□□□□□ -2.27
COL6A5A8TX70 AC093716.1-201ENST00000435923 377 ntBASIC0.87□□□□□ -2.27
COL6A5A8TX70 RNA5SP233-201ENST00000459153 113 ntBASIC0.87□□□□□ -2.27
COL6A5A8TX70 RPS23P3-201ENST00000470993 430 ntBASIC0.87□□□□□ -2.27
COL6A5A8TX70 HMGN1P10-201ENST00000474557 553 ntBASIC0.87□□□□□ -2.27
COL6A5A8TX70 RPL7P18-201ENST00000478965 734 ntBASIC0.87□□□□□ -2.27
COL6A5A8TX70 HMGB3P3-201ENST00000510526 400 ntBASIC0.87□□□□□ -2.27
COL6A5A8TX70 SNORD59.2-201ENST00000516873 68 ntBASIC0.87□□□□□ -2.27
COL6A5A8TX70 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC0.87□□□□□ -2.27
COL6A5A8TX70 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC0.87□□□□□ -2.27
COL6A5A8TX70 MIR4802-201ENST00000581881 80 ntBASIC0.87□□□□□ -2.27
COL6A5A8TX70 AL078605.1-201ENST00000603529 500 ntBASIC0.87□□□□□ -2.27
COL6A5A8TX70 AC245060.5-201ENST00000610778 3293 ntBASIC0.87□□□□□ -2.27
COL6A5A8TX70 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC0.87□□□□□ -2.27
COL6A5A8TX70 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.87□□□□□ -2.27
COL6A5A8TX70 RAB9AP5-201ENST00000437794 597 ntBASIC0.87□□□□□ -2.27
COL6A5A8TX70 RAB9AP2-201ENST00000443911 597 ntBASIC0.87□□□□□ -2.27
COL6A5A8TX70 UBBP3-201ENST00000445497 241 ntBASIC0.87□□□□□ -2.27
COL6A5A8TX70 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.87□□□□□ -2.27
COL6A5A8TX70 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC0.87□□□□□ -2.27
COL6A5A8TX70 AC118942.1-201ENST00000529674 1035 ntBASIC0.87□□□□□ -2.27
COL6A5A8TX70 SMILR-201ENST00000533992 553 ntTSL 4 BASIC0.87□□□□□ -2.27
COL6A5A8TX70 VN1R84P-201ENST00000593697 235 ntBASIC0.87□□□□□ -2.27
COL6A5A8TX70 AC090953.1-201ENST00000604305 1092 ntBASIC0.87□□□□□ -2.27
COL6A5A8TX70 AC006270.3-201ENST00000605967 1036 ntBASIC0.87□□□□□ -2.27
COL6A5A8TX70 AL031601.2-202ENST00000622650 282 ntBASIC0.87□□□□□ -2.27
COL6A5A8TX70 AL442644.1-201ENST00000454390 3105 ntBASIC0.87□□□□□ -2.27
COL6A5A8TX70 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.86□□□□□ -2.27
COL6A5A8TX70 RNU6-629P-201ENST00000384061 103 ntBASIC0.86□□□□□ -2.27
COL6A5A8TX70 MIR17-201ENST00000385012 84 ntBASIC0.86□□□□□ -2.27
COL6A5A8TX70 MIR532-201ENST00000385025 91 ntBASIC0.86□□□□□ -2.27
COL6A5A8TX70 SNRPEP2-201ENST00000397592 279 ntBASIC0.86□□□□□ -2.27
COL6A5A8TX70 FO393413.1-201ENST00000402892 195 ntBASIC0.86□□□□□ -2.27
COL6A5A8TX70 FTH1P15-201ENST00000406984 280 ntBASIC0.86□□□□□ -2.27
COL6A5A8TX70 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC0.86□□□□□ -2.27
COL6A5A8TX70 HMGN2P13-201ENST00000476476 274 ntBASIC0.86□□□□□ -2.27
COL6A5A8TX70 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.86□□□□□ -2.27
COL6A5A8TX70 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.86□□□□□ -2.27
COL6A5A8TX70 MIR4512-201ENST00000583257 77 ntBASIC0.86□□□□□ -2.27
COL6A5A8TX70 RPS15AP11-201ENST00000594193 385 ntBASIC0.86□□□□□ -2.27
COL6A5A8TX70 AC021755.4-201ENST00000616620 456 ntBASIC0.86□□□□□ -2.27
COL6A5A8TX70 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
COL6A5A8TX70 OR5H6-203ENST00000642105 978 ntBASIC0.86□□□□□ -2.27
COL6A5A8TX70 RNU1-78P-201ENST00000391248 165 ntBASIC0.86□□□□□ -2.27
COL6A5A8TX70 RPL5P19-201ENST00000404228 893 ntBASIC0.86□□□□□ -2.27
COL6A5A8TX70 LSM1P1-201ENST00000438629 273 ntBASIC0.86□□□□□ -2.27
COL6A5A8TX70 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.86□□□□□ -2.27
COL6A5A8TX70 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
COL6A5A8TX70 RPS15AP34-201ENST00000487776 387 ntBASIC0.86□□□□□ -2.27
COL6A5A8TX70 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.86□□□□□ -2.27
COL6A5A8TX70 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
COL6A5A8TX70 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
COL6A5A8TX70 RNU6-799P-201ENST00000363567 107 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 SNORA67.1-201ENST00000364749 141 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 Y_RNA.288-201ENST00000364854 92 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 AL022718.1-201ENST00000412004 84 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 RPL30P4-201ENST00000429309 333 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 AL161788.1-201ENST00000441805 169 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC0.85□□□□□ -2.27
COL6A5A8TX70 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.85□□□□□ -2.27
COL6A5A8TX70 AC026801.1-201ENST00000497178 464 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC0.85□□□□□ -2.27
COL6A5A8TX70 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC0.85□□□□□ -2.27
COL6A5A8TX70 RNU6-758P-201ENST00000516292 89 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 HMGB1P46-201ENST00000520062 610 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 OR4V1P-201ENST00000525394 1140 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.85□□□□□ -2.27
COL6A5A8TX70 AL512605.2-201ENST00000592972 256 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 AP006248.3-201ENST00000623580 594 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 MIR203B-201ENST00000636080 86 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 RNU6-17P-201ENST00000384245 107 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 RNU6-18P-201ENST00000384527 107 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 RNU6-1263P-201ENST00000384601 106 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 RNU4-72P-201ENST00000410754 173 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 AL136380.1-201ENST00000447970 162 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC0.85□□□□□ -2.27
COL6A5A8TX70 AC093852.1-201ENST00000503587 266 ntBASIC0.85□□□□□ -2.27
COL6A5A8TX70 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC0.85□□□□□ -2.27
COL6A5A8TX70 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC0.85□□□□□ -2.27
COL6A5A8TX70 AC113368.1-201ENST00000603736 382 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms