Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC104108.1-201ENST00000509930 412 ntBASIC0.64□□□□□ -2.31
LINC01549A6NIU2 PRELID3BP4-201ENST00000515476 571 ntBASIC0.64□□□□□ -2.31
LINC01549A6NIU2 SNORA44.1-201ENST00000517031 108 ntBASIC0.64□□□□□ -2.31
LINC01549A6NIU2 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.64□□□□□ -2.31
LINC01549A6NIU2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.64□□□□□ -2.31
LINC01549A6NIU2 SNRPGP16-201ENST00000533275 226 ntBASIC0.64□□□□□ -2.31
LINC01549A6NIU2 AC010186.2-204ENST00000537668 439 ntBASIC0.64□□□□□ -2.31
LINC01549A6NIU2 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.64□□□□□ -2.31
LINC01549A6NIU2 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC0.64□□□□□ -2.31
LINC01549A6NIU2 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.64□□□□□ -2.31
LINC01549A6NIU2 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.64□□□□□ -2.31
LINC01549A6NIU2 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.64□□□□□ -2.31
LINC01549A6NIU2 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC0.64□□□□□ -2.31
LINC01549A6NIU2 MIR6078-201ENST00000611069 100 ntBASIC0.64□□□□□ -2.31
LINC01549A6NIU2 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.64□□□□□ -2.31
LINC01549A6NIU2 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.64□□□□□ -2.31
LINC01549A6NIU2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.64□□□□□ -2.31
LINC01549A6NIU2 MTND5P28-201ENST00000438005 1594 ntBASIC0.63□□□□□ -2.31
LINC01549A6NIU2 RNA5SP125-201ENST00000364843 120 ntBASIC0.63□□□□□ -2.31
LINC01549A6NIU2 RNU6-761P-201ENST00000384148 107 ntBASIC0.63□□□□□ -2.31
LINC01549A6NIU2 SNORA70.7-201ENST00000384159 133 ntBASIC0.63□□□□□ -2.31
LINC01549A6NIU2 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
LINC01549A6NIU2 HMGN2P39-201ENST00000398005 273 ntBASIC0.63□□□□□ -2.31
LINC01549A6NIU2 RPL37P10-201ENST00000412884 288 ntBASIC0.63□□□□□ -2.31
LINC01549A6NIU2 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC0.63□□□□□ -2.31
LINC01549A6NIU2 AC245047.4-201ENST00000433189 144 ntBASIC0.63□□□□□ -2.31
LINC01549A6NIU2 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC0.63□□□□□ -2.31
LINC01549A6NIU2 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.63□□□□□ -2.31
LINC01549A6NIU2 OR6C72P-201ENST00000451403 892 ntBASIC0.63□□□□□ -2.31
LINC01549A6NIU2 RNU6-775P-201ENST00000459318 96 ntBASIC0.63□□□□□ -2.31
LINC01549A6NIU2 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.63□□□□□ -2.31
LINC01549A6NIU2 AC093852.1-201ENST00000503587 266 ntBASIC0.63□□□□□ -2.31
LINC01549A6NIU2 AC116337.1-201ENST00000509680 687 ntBASIC0.63□□□□□ -2.31
LINC01549A6NIU2 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC0.63□□□□□ -2.31
LINC01549A6NIU2 RNU6-351P-201ENST00000516097 100 ntBASIC0.63□□□□□ -2.31
LINC01549A6NIU2 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.63□□□□□ -2.31
LINC01549A6NIU2 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC0.63□□□□□ -2.31
LINC01549A6NIU2 AC019288.1-201ENST00000557918 224 ntBASIC0.63□□□□□ -2.31
LINC01549A6NIU2 VN1R81P-201ENST00000602085 372 ntBASIC0.63□□□□□ -2.31
LINC01549A6NIU2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.63□□□□□ -2.31
LINC01549A6NIU2 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC0.63□□□□□ -2.31
LINC01549A6NIU2 MIR6857-201ENST00000613267 93 ntBASIC0.63□□□□□ -2.31
LINC01549A6NIU2 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC0.63□□□□□ -2.31
LINC01549A6NIU2 MIR515-2-201ENST00000384883 83 ntBASIC0.62□□□□□ -2.31
LINC01549A6NIU2 MIR515-1-201ENST00000384884 83 ntBASIC0.62□□□□□ -2.31
LINC01549A6NIU2 RNU6-1328P-201ENST00000410938 106 ntBASIC0.62□□□□□ -2.31
LINC01549A6NIU2 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.62□□□□□ -2.31
LINC01549A6NIU2 TEX41-202ENST00000414256 604 ntTSL 5 BASIC0.62□□□□□ -2.31
LINC01549A6NIU2 EDDM3CP-201ENST00000415977 425 ntBASIC0.62□□□□□ -2.31
LINC01549A6NIU2 AL109913.1-201ENST00000421173 514 ntBASIC0.62□□□□□ -2.31
LINC01549A6NIU2 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.62□□□□□ -2.31
LINC01549A6NIU2 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.62□□□□□ -2.31
LINC01549A6NIU2 HMGB3P12-201ENST00000438745 556 ntBASIC0.62□□□□□ -2.31
LINC01549A6NIU2 RPL32P28-201ENST00000443577 397 ntBASIC0.62□□□□□ -2.31
LINC01549A6NIU2 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC0.62□□□□□ -2.31
LINC01549A6NIU2 RPL21P5-201ENST00000554662 472 ntBASIC0.62□□□□□ -2.31
LINC01549A6NIU2 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.62□□□□□ -2.31
LINC01549A6NIU2 AL731537.2-201ENST00000561565 951 ntBASIC0.62□□□□□ -2.31
LINC01549A6NIU2 AC106782.4-201ENST00000568264 210 ntBASIC0.62□□□□□ -2.31
LINC01549A6NIU2 HOTTIP_4.1-201ENST00000618195 165 ntBASIC0.62□□□□□ -2.31
LINC01549A6NIU2 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
LINC01549A6NIU2 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC0.62□□□□□ -2.31
LINC01549A6NIU2 AL359893.1-201ENST00000447628 1580 ntBASIC0.62□□□□□ -2.31
LINC01549A6NIU2 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
LINC01549A6NIU2 MIR424-201ENST00000362227 98 ntBASIC0.61□□□□□ -2.31
LINC01549A6NIU2 MIR532-201ENST00000385025 91 ntBASIC0.61□□□□□ -2.31
LINC01549A6NIU2 RPS7P9-201ENST00000414704 586 ntBASIC0.61□□□□□ -2.31
LINC01549A6NIU2 MTCYBP7-201ENST00000419540 1134 ntBASIC0.61□□□□□ -2.31
LINC01549A6NIU2 AL714022.1-201ENST00000439897 151 ntBASIC0.61□□□□□ -2.31
LINC01549A6NIU2 RPS27P1-201ENST00000450552 247 ntBASIC0.61□□□□□ -2.31
LINC01549A6NIU2 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC0.61□□□□□ -2.31
LINC01549A6NIU2 snoU13.7-201ENST00000459220 104 ntBASIC0.61□□□□□ -2.31
LINC01549A6NIU2 snoU13.28-201ENST00000459235 104 ntBASIC0.61□□□□□ -2.31
LINC01549A6NIU2 AC116337.2-201ENST00000477662 156 ntBASIC0.61□□□□□ -2.31
LINC01549A6NIU2 TRBV12-1-201ENST00000479785 344 ntBASIC0.61□□□□□ -2.31
LINC01549A6NIU2 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC0.61□□□□□ -2.31
LINC01549A6NIU2 AC018437.1-201ENST00000492214 406 ntBASIC0.61□□□□□ -2.31
LINC01549A6NIU2 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.61□□□□□ -2.31
LINC01549A6NIU2 LTV1P1-201ENST00000510683 1237 ntBASIC0.61□□□□□ -2.31
LINC01549A6NIU2 AC133963.2-201ENST00000513686 578 ntBASIC0.61□□□□□ -2.31
LINC01549A6NIU2 AC112198.4-201ENST00000515450 351 ntBASIC0.61□□□□□ -2.31
LINC01549A6NIU2 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.61□□□□□ -2.31
LINC01549A6NIU2 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.61□□□□□ -2.31
LINC01549A6NIU2 AC018630.1-201ENST00000541376 925 ntBASIC0.61□□□□□ -2.31
LINC01549A6NIU2 DNAJC19P9-201ENST00000555084 351 ntBASIC0.61□□□□□ -2.31
LINC01549A6NIU2 AC027807.1-201ENST00000559921 996 ntBASIC0.61□□□□□ -2.31
LINC01549A6NIU2 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC0.61□□□□□ -2.31
LINC01549A6NIU2 NIFKP6-201ENST00000598115 845 ntBASIC0.61□□□□□ -2.31
LINC01549A6NIU2 XIAPP1-201ENST00000603162 600 ntBASIC0.61□□□□□ -2.31
LINC01549A6NIU2 AL355877.2-201ENST00000603670 358 ntBASIC0.61□□□□□ -2.31
LINC01549A6NIU2 AL590410.1-201ENST00000617925 333 ntBASIC0.61□□□□□ -2.31
LINC01549A6NIU2 AC027309.3-201ENST00000623419 351 ntBASIC0.61□□□□□ -2.31
LINC01549A6NIU2 AL136313.1-201ENST00000624804 202 ntBASIC0.61□□□□□ -2.31
LINC01549A6NIU2 SNORA25.8-201ENST00000364831 128 ntBASIC0.6□□□□□ -2.31
LINC01549A6NIU2 RNU6-1293P-201ENST00000384077 107 ntBASIC0.6□□□□□ -2.31
LINC01549A6NIU2 MIR30A-201ENST00000385092 71 ntBASIC0.6□□□□□ -2.31
LINC01549A6NIU2 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC0.6□□□□□ -2.31
LINC01549A6NIU2 RNU6-272P-201ENST00000411028 104 ntBASIC0.6□□□□□ -2.31
LINC01549A6NIU2 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.6□□□□□ -2.31
LINC01549A6NIU2 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms