Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDZRN3Q9UPQ7 GABPAP-201ENST00000419271 1356 ntBASIC6.22□□□□□ -1.41
PDZRN3Q9UPQ7 RNU6-923P-201ENST00000364753 107 ntBASIC6.22□□□□□ -1.41
PDZRN3Q9UPQ7 RNU6-449P-201ENST00000383914 107 ntBASIC6.22□□□□□ -1.41
PDZRN3Q9UPQ7 SNORA70F-201ENST00000384142 135 ntBASIC6.22□□□□□ -1.41
PDZRN3Q9UPQ7 SNORA70.10-201ENST00000384515 134 ntBASIC6.22□□□□□ -1.41
PDZRN3Q9UPQ7 AL022722.2-201ENST00000402519 180 ntBASIC6.22□□□□□ -1.41
PDZRN3Q9UPQ7 MTND3P9-201ENST00000429526 346 ntBASIC6.22□□□□□ -1.41
PDZRN3Q9UPQ7 RPL37P1-201ENST00000432310 284 ntBASIC6.22□□□□□ -1.41
PDZRN3Q9UPQ7 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC6.22□□□□□ -1.41
PDZRN3Q9UPQ7 RPL30P1-201ENST00000488676 339 ntBASIC6.22□□□□□ -1.41
PDZRN3Q9UPQ7 RN7SKP122-201ENST00000515923 296 ntBASIC6.22□□□□□ -1.41
PDZRN3Q9UPQ7 RNU6-971P-201ENST00000516920 106 ntBASIC6.22□□□□□ -1.41
PDZRN3Q9UPQ7 AP002001.1-203ENST00000534002 267 ntBASIC6.22□□□□□ -1.41
PDZRN3Q9UPQ7 AL121576.1-201ENST00000556055 276 ntBASIC6.22□□□□□ -1.41
PDZRN3Q9UPQ7 AMZ2P1-203ENST00000565833 850 ntBASIC6.22□□□□□ -1.41
PDZRN3Q9UPQ7 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC6.22□□□□□ -1.41
PDZRN3Q9UPQ7 CYCSP40-201ENST00000575927 294 ntBASIC6.22□□□□□ -1.41
PDZRN3Q9UPQ7 MIR4472-2-201ENST00000582069 67 ntBASIC6.22□□□□□ -1.41
PDZRN3Q9UPQ7 MIR4715-201ENST00000584117 79 ntBASIC6.22□□□□□ -1.41
PDZRN3Q9UPQ7 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC6.22□□□□□ -1.41
PDZRN3Q9UPQ7 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDZRN3Q9UPQ7 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDZRN3Q9UPQ7 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDZRN3Q9UPQ7 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
PDZRN3Q9UPQ7 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDZRN3Q9UPQ7 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
PDZRN3Q9UPQ7 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.41
PDZRN3Q9UPQ7 AC009902.3-201ENST00000606235 2172 ntBASIC6.21□□□□□ -1.41
PDZRN3Q9UPQ7 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.21□□□□□ -1.41
PDZRN3Q9UPQ7 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
PDZRN3Q9UPQ7 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 RNU6-188P-201ENST00000364207 107 ntBASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 U8.7-201ENST00000364940 136 ntBASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 Y_RNA.439-201ENST00000384119 94 ntBASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 MIR186-201ENST00000384988 86 ntBASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 SNORA69.1-201ENST00000390904 137 ntBASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 Y_RNA.592-201ENST00000410274 109 ntBASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 AC114755.2-201ENST00000413520 361 ntBASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 AC108734.1-201ENST00000439549 399 ntBASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 RPS5P7-201ENST00000456664 608 ntBASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 RNU2-69P-201ENST00000516061 100 ntBASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 RNA5SP249-201ENST00000516127 99 ntBASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 RN7SKP283-201ENST00000517197 270 ntBASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 FAM60BP-201ENST00000578364 658 ntBASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 AL162424.1-201ENST00000602325 221 ntBASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 AL590392.1-201ENST00000604960 446 ntBASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 AL356218.2-201ENST00000605264 187 ntBASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 AC023813.4-201ENST00000607580 580 ntBASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 Z99571.1-201ENST00000636677 394 ntBASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 ZNF33CP-201ENST00000432492 2030 ntBASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 HSP90AA4P-202ENST00000506915 2228 ntBASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PDZRN3Q9UPQ7 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 AC008568.2-201ENST00000623862 2313 ntBASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 RNU6-28P-201ENST00000362378 107 ntBASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 RNU6-393P-201ENST00000384475 107 ntBASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 RNU6-102P-201ENST00000384485 104 ntBASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 MIR569-201ENST00000385228 96 ntBASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 AL136372.1-201ENST00000403060 228 ntBASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 Y_RNA.602-201ENST00000410535 92 ntBASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 RNU6-651P-201ENST00000411040 105 ntBASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 ELOCP19-201ENST00000411919 318 ntBASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 EI24P1-201ENST00000416584 867 ntBASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 MTATP6P4-201ENST00000427725 675 ntBASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 AL589765.3-201ENST00000446084 462 ntBASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 AL161747.1-201ENST00000480068 358 ntBASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 UBA52P3-201ENST00000491303 382 ntBASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 RNU6-685P-201ENST00000517088 95 ntBASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 CYCSP27-201ENST00000527643 293 ntBASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 AL020997.2-201ENST00000602607 184 ntBASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 AL359547.2-201ENST00000615810 418 ntBASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC6.2□□□□□ -1.42
PDZRN3Q9UPQ7 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC6.19□□□□□ -1.42
PDZRN3Q9UPQ7 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms