Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CUEDC1Q9NWM3 AP001273.1-201ENST00000624493 3152 ntBASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 MAPK10-328ENST00000641553 4009 ntBASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 SNORA73.1-201ENST00000363107 205 ntBASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 Y_RNA.353-201ENST00000365440 108 ntBASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 RNU6-102P-201ENST00000384485 104 ntBASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 RNU6-14P-201ENST00000384630 106 ntBASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 MIR135A2-201ENST00000384854 100 ntBASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 AL645733.1-201ENST00000402250 217 ntBASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 USP9YP7-201ENST00000436723 430 ntBASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 USP9YP32-201ENST00000452432 430 ntBASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 AL645939.1-201ENST00000453429 797 ntBASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 HSPE1P25-201ENST00000455484 251 ntBASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 RN7SKP210-201ENST00000459176 261 ntBASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 RPS18P6-201ENST00000476880 458 ntBASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 RPS27P26-201ENST00000494583 239 ntBASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 SNORA31.20-201ENST00000517111 133 ntBASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 AC037487.3-201ENST00000606668 112 ntBASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 AC240442.1-201ENST00000616055 283 ntBASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 MIR8080-201ENST00000622224 89 ntBASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
CUEDC1Q9NWM3 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 RPL9P7-201ENST00000330965 580 ntBASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 SNORD56.6-201ENST00000384569 71 ntBASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 Y_RNA.568-201ENST00000384742 113 ntBASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 DUTP5-201ENST00000406790 469 ntBASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 AC138761.5-201ENST00000433967 325 ntBASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 AL513043.1-201ENST00000439124 535 ntBASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 AC073465.2-201ENST00000440938 498 ntBASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 AC008267.6-201ENST00000441664 139 ntBASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 AL360271.2-201ENST00000447710 161 ntBASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 RPL9P9-202ENST00000466501 579 ntBASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 AC100832.1-201ENST00000471945 383 ntBASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 RN7SL547P-201ENST00000490793 290 ntBASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 AC074133.1-201ENST00000515696 183 ntBASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 FKBP1BP1-201ENST00000553366 325 ntBASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 RN7SL708P-201ENST00000580952 299 ntBASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 MIR4660-201ENST00000583549 74 ntBASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 MIR15A-201ENST00000607334 83 ntBASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 MIR8076-201ENST00000611401 83 ntBASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 MIR6130-201ENST00000619419 109 ntBASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CUEDC1Q9NWM3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 AL592182.3-201ENST00000642132 3304 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 AP001029.2-203ENST00000589795 4910 ntBASIC5.26□□□□□ -1.57
CUEDC1Q9NWM3 RNA5SP319-201ENST00000362768 119 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms