Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDLIM7Q9NR12 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 RNU6-960P-201ENST00000364056 120 ntBASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 Y_RNA.482-201ENST00000384377 111 ntBASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 AL139397.2-201ENST00000404529 772 ntBASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 RNU2-47P-201ENST00000410649 186 ntBASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 RPL30P2-201ENST00000414021 291 ntBASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 AF228730.2-201ENST00000438784 848 ntBASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 RPS3AP12-201ENST00000443616 753 ntBASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 MTND1P17-201ENST00000448961 204 ntBASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 SNORD97-201ENST00000459187 142 ntBASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 MIR2053-201ENST00000459295 91 ntBASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 ST13P14-201ENST00000474095 734 ntBASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 AC108078.2-201ENST00000510750 236 ntBASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 SNORA74D-201ENST00000516404 141 ntBASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 AC008694.2-201ENST00000517591 306 ntBASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 AC012409.4-201ENST00000612923 249 ntBASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDLIM7Q9NR12 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 RNU1-15P-201ENST00000353977 144 ntBASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 Y_RNA.148-201ENST00000363557 117 ntBASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 MIR568-201ENST00000385036 95 ntBASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 RNU6-550P-201ENST00000391057 101 ntBASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 RNU4-6P-201ENST00000410804 122 ntBASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 AC108059.2-201ENST00000434626 151 ntBASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 RPL35AP22-201ENST00000436855 335 ntBASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 AL353748.1-201ENST00000440753 474 ntBASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 TXNP1-201ENST00000441872 371 ntBASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 SCARNA18-201ENST00000459004 134 ntBASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 RPL21P8-201ENST00000465083 535 ntBASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 RNU6-1213P-201ENST00000517075 94 ntBASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 RN7SKP295-201ENST00000517264 153 ntBASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 HMGB1P19-201ENST00000517578 577 ntBASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 IGKV2D-36-201ENST00000518643 226 ntBASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 RANP9-201ENST00000519957 271 ntBASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 DEFB108D-201ENST00000527787 222 ntBASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 SETP7-201ENST00000552169 453 ntBASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 AC120057.2-201ENST00000571520 271 ntBASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 AC023043.2-201ENST00000589678 1026 ntBASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 AL157817.1-201ENST00000614264 790 ntBASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 AC087588.2-201ENST00000617667 426 ntBASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 AL354798.1-201ENST00000622505 329 ntBASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDLIM7Q9NR12 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PDLIM7Q9NR12 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.65□□□□□ -1.66
PDLIM7Q9NR12 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.65□□□□□ -1.66
PDLIM7Q9NR12 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PDLIM7Q9NR12 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PDLIM7Q9NR12 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PDLIM7Q9NR12 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PDLIM7Q9NR12 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.65□□□□□ -1.67
PDLIM7Q9NR12 Y_RNA.212-201ENST00000364177 102 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms