Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 SNORA74D-201ENST00000516404 141 ntBASIC2.94□□□□□ -1.94
UBQLN3Q9H347 RNU6-928P-201ENST00000516876 104 ntBASIC2.94□□□□□ -1.94
UBQLN3Q9H347 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.94□□□□□ -1.94
UBQLN3Q9H347 AC107934.1-201ENST00000522215 217 ntBASIC2.94□□□□□ -1.94
UBQLN3Q9H347 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.94□□□□□ -1.94
UBQLN3Q9H347 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.94□□□□□ -1.94
UBQLN3Q9H347 HMGB1P6-201ENST00000569046 646 ntBASIC2.94□□□□□ -1.94
UBQLN3Q9H347 MIR4293-201ENST00000584305 78 ntBASIC2.94□□□□□ -1.94
UBQLN3Q9H347 BX664608.1-201ENST00000610519 487 ntBASIC2.94□□□□□ -1.94
UBQLN3Q9H347 AL591516.1-201ENST00000611326 274 ntBASIC2.94□□□□□ -1.94
UBQLN3Q9H347 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.94□□□□□ -1.94
UBQLN3Q9H347 AC006338.1-201ENST00000618453 749 ntBASIC2.94□□□□□ -1.94
UBQLN3Q9H347 AC009878.1-201ENST00000621819 340 ntBASIC2.94□□□□□ -1.94
UBQLN3Q9H347 AC091953.2-201ENST00000623979 160 ntBASIC2.94□□□□□ -1.94
UBQLN3Q9H347 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
UBQLN3Q9H347 RNU4-21P-201ENST00000362802 126 ntBASIC2.93□□□□□ -1.94
UBQLN3Q9H347 AL359634.1-202ENST00000404721 284 ntBASIC2.93□□□□□ -1.94
UBQLN3Q9H347 RNU2-62P-201ENST00000410868 191 ntBASIC2.93□□□□□ -1.94
UBQLN3Q9H347 ATG3P1-201ENST00000419507 911 ntBASIC2.93□□□□□ -1.94
UBQLN3Q9H347 SDCBPP3-201ENST00000419629 891 ntBASIC2.93□□□□□ -1.94
UBQLN3Q9H347 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.93□□□□□ -1.94
UBQLN3Q9H347 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.93□□□□□ -1.94
UBQLN3Q9H347 RPL23AP69-201ENST00000431134 458 ntBASIC2.93□□□□□ -1.94
UBQLN3Q9H347 MTATP6P30-201ENST00000443540 664 ntBASIC2.93□□□□□ -1.94
UBQLN3Q9H347 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.93□□□□□ -1.94
UBQLN3Q9H347 GAPDHP27-201ENST00000447427 1020 ntBASIC2.93□□□□□ -1.94
UBQLN3Q9H347 snoU13.28-201ENST00000459235 104 ntBASIC2.93□□□□□ -1.94
UBQLN3Q9H347 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.93□□□□□ -1.94
UBQLN3Q9H347 MTND4LP3-201ENST00000468320 276 ntBASIC2.93□□□□□ -1.94
UBQLN3Q9H347 KC877373.1-201ENST00000479066 408 ntBASIC2.93□□□□□ -1.94
UBQLN3Q9H347 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.93□□□□□ -1.94
UBQLN3Q9H347 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.93□□□□□ -1.94
UBQLN3Q9H347 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.93□□□□□ -1.94
UBQLN3Q9H347 AC010486.3-201ENST00000511602 785 ntBASIC2.93□□□□□ -1.94
UBQLN3Q9H347 MTND5P13-201ENST00000513046 1079 ntBASIC2.93□□□□□ -1.94
UBQLN3Q9H347 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
UBQLN3Q9H347 RNA5SP291-201ENST00000517222 105 ntBASIC2.93□□□□□ -1.94
UBQLN3Q9H347 AC060788.1-201ENST00000521318 469 ntBASIC2.93□□□□□ -1.94
UBQLN3Q9H347 AP003181.2-201ENST00000528941 181 ntBASIC2.93□□□□□ -1.94
UBQLN3Q9H347 AC022878.1-201ENST00000530684 149 ntBASIC2.93□□□□□ -1.94
UBQLN3Q9H347 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.93□□□□□ -1.94
UBQLN3Q9H347 MIR3118-1-201ENST00000581787 76 ntBASIC2.93□□□□□ -1.94
UBQLN3Q9H347 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.93□□□□□ -1.94
UBQLN3Q9H347 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.93□□□□□ -1.94
UBQLN3Q9H347 DPPA3P3-201ENST00000603842 430 ntBASIC2.93□□□□□ -1.94
UBQLN3Q9H347 AC025048.6-202ENST00000627667 438 ntBASIC2.93□□□□□ -1.94
UBQLN3Q9H347 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.93□□□□□ -1.94
UBQLN3Q9H347 MIR3974-201ENST00000637126 96 ntBASIC2.93□□□□□ -1.94
UBQLN3Q9H347 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.93□□□□□ -1.94
UBQLN3Q9H347 AC092104.1-201ENST00000497346 1441 ntBASIC2.93□□□□□ -1.94
UBQLN3Q9H347 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
UBQLN3Q9H347 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.92□□□□□ -1.94
UBQLN3Q9H347 AL049641.1-201ENST00000441055 1948 ntBASIC2.92□□□□□ -1.94
UBQLN3Q9H347 OR1S2-201ENST00000302592 978 ntBASIC2.92□□□□□ -1.94
UBQLN3Q9H347 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
UBQLN3Q9H347 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.92□□□□□ -1.94
UBQLN3Q9H347 RNU6-741P-201ENST00000383889 107 ntBASIC2.92□□□□□ -1.94
UBQLN3Q9H347 MIR483-201ENST00000385070 76 ntBASIC2.92□□□□□ -1.94
UBQLN3Q9H347 MRPL42P2-201ENST00000403169 426 ntBASIC2.92□□□□□ -1.94
UBQLN3Q9H347 Y_RNA.598-201ENST00000410480 95 ntBASIC2.92□□□□□ -1.94
UBQLN3Q9H347 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.92□□□□□ -1.94
UBQLN3Q9H347 AC006366.1-201ENST00000422002 759 ntBASIC2.92□□□□□ -1.94
UBQLN3Q9H347 AL353678.1-201ENST00000422735 741 ntBASIC2.92□□□□□ -1.94
UBQLN3Q9H347 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.92□□□□□ -1.94
UBQLN3Q9H347 AC244035.1-201ENST00000430042 390 ntBASIC2.92□□□□□ -1.94
UBQLN3Q9H347 FCF1P1-201ENST00000432690 571 ntBASIC2.92□□□□□ -1.94
UBQLN3Q9H347 ARPC3P1-201ENST00000437218 533 ntBASIC2.92□□□□□ -1.94
UBQLN3Q9H347 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.92□□□□□ -1.94
UBQLN3Q9H347 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.92□□□□□ -1.94
UBQLN3Q9H347 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.92□□□□□ -1.94
UBQLN3Q9H347 AL135752.1-201ENST00000479477 471 ntBASIC2.92□□□□□ -1.94
UBQLN3Q9H347 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.92□□□□□ -1.94
UBQLN3Q9H347 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.92□□□□□ -1.94
UBQLN3Q9H347 FABP5P5-201ENST00000515537 406 ntBASIC2.92□□□□□ -1.94
UBQLN3Q9H347 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.92□□□□□ -1.94
UBQLN3Q9H347 RNU6-1282P-201ENST00000516735 96 ntBASIC2.92□□□□□ -1.94
UBQLN3Q9H347 AC100870.1-201ENST00000522035 505 ntBASIC2.92□□□□□ -1.94
UBQLN3Q9H347 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.92□□□□□ -1.94
UBQLN3Q9H347 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.92□□□□□ -1.94
UBQLN3Q9H347 MIR4506-201ENST00000584693 77 ntBASIC2.92□□□□□ -1.94
UBQLN3Q9H347 AP000860.1-201ENST00000605250 559 ntBASIC2.92□□□□□ -1.94
UBQLN3Q9H347 OR2AS2P-201ENST00000606902 342 ntBASIC2.92□□□□□ -1.94
UBQLN3Q9H347 RNU6-87P-201ENST00000607561 108 ntBASIC2.92□□□□□ -1.94
UBQLN3Q9H347 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.92□□□□□ -1.94
UBQLN3Q9H347 AC138932.5-201ENST00000617759 563 ntBASIC2.92□□□□□ -1.94
UBQLN3Q9H347 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.92□□□□□ -1.94
UBQLN3Q9H347 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
UBQLN3Q9H347 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
UBQLN3Q9H347 AP003122.5-201ENST00000527668 3766 ntBASIC2.92□□□□□ -1.94
UBQLN3Q9H347 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
UBQLN3Q9H347 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
UBQLN3Q9H347 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.91□□□□□ -1.94
UBQLN3Q9H347 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
UBQLN3Q9H347 RNA5SP374-201ENST00000362939 125 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
UBQLN3Q9H347 RNU6-1035P-201ENST00000384477 107 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 RPL21P3-201ENST00000395517 478 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 Z85995.1-201ENST00000415547 335 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 AC090960.1-201ENST00000421072 306 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms