Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS11Q9H270 RPS17P13-201ENST00000448974 407 ntBASIC4.31□□□□□ -1.72
VPS11Q9H270 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS11Q9H270 AC234775.1-201ENST00000454247 670 ntBASIC4.31□□□□□ -1.72
VPS11Q9H270 HMGB3P17-201ENST00000504195 649 ntBASIC4.31□□□□□ -1.72
VPS11Q9H270 AC110794.1-201ENST00000505816 425 ntBASIC4.31□□□□□ -1.72
VPS11Q9H270 MRPS35P2-201ENST00000508242 191 ntBASIC4.31□□□□□ -1.72
VPS11Q9H270 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS11Q9H270 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VPS11Q9H270 RNU6-635P-201ENST00000516651 102 ntBASIC4.31□□□□□ -1.72
VPS11Q9H270 RN7SKP219-201ENST00000516825 296 ntBASIC4.31□□□□□ -1.72
VPS11Q9H270 RNU6-410P-201ENST00000517006 107 ntBASIC4.31□□□□□ -1.72
VPS11Q9H270 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS11Q9H270 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.31□□□□□ -1.72
VPS11Q9H270 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS11Q9H270 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.31□□□□□ -1.72
VPS11Q9H270 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS11Q9H270 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS11Q9H270 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS11Q9H270 AL356432.3-201ENST00000568952 465 ntBASIC4.31□□□□□ -1.72
VPS11Q9H270 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS11Q9H270 MIR4436B2-201ENST00000581415 91 ntBASIC4.31□□□□□ -1.72
VPS11Q9H270 AC060771.1-201ENST00000582031 164 ntBASIC4.31□□□□□ -1.72
VPS11Q9H270 AC069061.3-201ENST00000582254 823 ntBASIC4.31□□□□□ -1.72
VPS11Q9H270 MIR4436B1-201ENST00000583272 91 ntBASIC4.31□□□□□ -1.72
VPS11Q9H270 BNIP3P25-201ENST00000596023 559 ntBASIC4.31□□□□□ -1.72
VPS11Q9H270 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS11Q9H270 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS11Q9H270 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS11Q9H270 AC018889.1-201ENST00000605372 397 ntBASIC4.31□□□□□ -1.72
VPS11Q9H270 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS11Q9H270 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS11Q9H270 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS11Q9H270 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VPS11Q9H270 MARK2P15-201ENST00000432204 2186 ntBASIC4.31□□□□□ -1.72
VPS11Q9H270 ZNF962P-201ENST00000443465 3140 ntBASIC4.31□□□□□ -1.72
VPS11Q9H270 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS11Q9H270 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS11Q9H270 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS11Q9H270 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS11Q9H270 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
VPS11Q9H270 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.3□□□□□ -1.72
VPS11Q9H270 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
VPS11Q9H270 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS11Q9H270 USP8P1-201ENST00000494673 3183 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS11Q9H270 RNU6-1078P-201ENST00000364522 103 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 RNA5SP513-201ENST00000364648 118 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 RNU4-66P-201ENST00000365199 138 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 RNU6-1062P-201ENST00000383908 107 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 Y_RNA.530-201ENST00000384587 101 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 MIR3065-201ENST00000390137 79 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
VPS11Q9H270 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
VPS11Q9H270 RPL7P60-201ENST00000397636 735 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 AC074085.1-201ENST00000413598 418 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.3□□□□□ -1.72
VPS11Q9H270 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VPS11Q9H270 SKA2P1-201ENST00000425592 390 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 AL590762.4-201ENST00000425885 253 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 ARL5AP4-201ENST00000430731 512 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.3□□□□□ -1.72
VPS11Q9H270 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS11Q9H270 FABP5P14-201ENST00000437273 393 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.3□□□□□ -1.72
VPS11Q9H270 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 AC079781.2-201ENST00000446424 169 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS11Q9H270 AC010326.1-201ENST00000462726 602 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 AC110792.1-201ENST00000491826 472 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 FTH1P9-201ENST00000513251 355 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 RNU6-1213P-201ENST00000517075 94 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 TOMM20P2-201ENST00000540082 421 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.3□□□□□ -1.72
VPS11Q9H270 IMMP1LP2-201ENST00000552954 492 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 NCAPGP2-201ENST00000557911 754 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.3□□□□□ -1.72
VPS11Q9H270 MIR4424-201ENST00000585257 86 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.3□□□□□ -1.72
VPS11Q9H270 AC016727.2-201ENST00000603988 621 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 AC024940.4-201ENST00000605507 246 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 PRR13P7-201ENST00000605538 430 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 AC064801.1-201ENST00000612025 407 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 MIR6130-201ENST00000619419 109 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 AC007546.1-201ENST00000619452 559 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 MIR7702-201ENST00000621931 59 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
VPS11Q9H270 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
VPS11Q9H270 AC004972.1-201ENST00000623934 2209 ntBASIC4.3□□□□□ -1.72
VPS11Q9H270 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VPS11Q9H270 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.3□□□□□ -1.72
VPS11Q9H270 MTND5P30-201ENST00000452896 1731 ntBASIC4.29□□□□□ -1.72
VPS11Q9H270 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS11Q9H270 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS11Q9H270 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS11Q9H270 RNU4-48P-201ENST00000365559 182 ntBASIC4.29□□□□□ -1.72
VPS11Q9H270 RNU6-310P-201ENST00000384655 107 ntBASIC4.29□□□□□ -1.72
VPS11Q9H270 MIR550A3-201ENST00000390735 95 ntBASIC4.29□□□□□ -1.72
VPS11Q9H270 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms