Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
ZNF48Q96MX3 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
ZNF48Q96MX3 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZNF48Q96MX3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZNF48Q96MX3 TAB3P1-202ENST00000452645 1634 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 Y_RNA.167-201ENST00000363735 109 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 U3.11-201ENST00000364476 212 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 RNU1-64P-201ENST00000365443 163 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 RNU1-63P-201ENST00000383902 164 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 Y_RNA.401-201ENST00000383965 117 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 RNU6-629P-201ENST00000384061 103 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 MIR19A-201ENST00000384878 82 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 MIR568-201ENST00000385036 95 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 RNU2-29P-201ENST00000410423 189 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 ARL5AP1-201ENST00000418991 388 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.53□□□□□ -1.84
ZNF48Q96MX3 RPL21P89-201ENST00000444021 467 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.53□□□□□ -1.84
ZNF48Q96MX3 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AL118520.1-201ENST00000450770 291 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ZNF48Q96MX3 HMGB3P22-202ENST00000451823 572 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ZNF48Q96MX3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.53□□□□□ -1.84
ZNF48Q96MX3 PLGLA-201ENST00000465668 449 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 RPS26P28-201ENST00000470806 348 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AC022034.3-201ENST00000471393 478 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AL135752.1-201ENST00000479477 471 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AC083904.1-201ENST00000487828 231 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 RN7SL691P-201ENST00000494487 301 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AC093767.1-201ENST00000504523 156 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AC008958.1-201ENST00000511047 682 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.53□□□□□ -1.84
ZNF48Q96MX3 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.53□□□□□ -1.84
ZNF48Q96MX3 SMURF2P1-201ENST00000514992 481 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 RNU6-1137P-201ENST00000517073 99 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AP004371.1-201ENST00000525240 214 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 COX6CP5-201ENST00000527162 228 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AC011979.2-201ENST00000527568 352 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AP000889.2-201ENST00000532684 490 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AC024224.1-201ENST00000538284 609 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AC069240.1-201ENST00000548774 375 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AL117187.1-201ENST00000555482 181 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 MIR4703-201ENST00000577728 79 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AL669831.4-202ENST00000590817 238 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 BNIP3P25-201ENST00000596023 559 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AC020914.4-201ENST00000597690 277 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AP000654.2-201ENST00000605633 586 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AC092807.2-201ENST00000609367 243 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AC087588.2-201ENST00000617667 426 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AC007546.1-201ENST00000619452 559 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AC103858.2-201ENST00000621471 543 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AC244100.1-202ENST00000621554 382 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AC048347.1-201ENST00000624621 427 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZNF48Q96MX3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZNF48Q96MX3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZNF48Q96MX3 OTUD4P1-201ENST00000237841 3067 ntBASIC3.53□□□□□ -1.84
ZNF48Q96MX3 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ZNF48Q96MX3 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.53□□□□□ -1.84
ZNF48Q96MX3 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
ZNF48Q96MX3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZNF48Q96MX3 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.53□□□□□ -1.85
ZNF48Q96MX3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.85
ZNF48Q96MX3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.85
ZNF48Q96MX3 NXPH1-205ENST00000602349 1953 ntBASIC3.52□□□□□ -1.85
ZNF48Q96MX3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
ZNF48Q96MX3 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ZNF48Q96MX3 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
ZNF48Q96MX3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
ZNF48Q96MX3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
ZNF48Q96MX3 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ZNF48Q96MX3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.52□□□□□ -1.85
ZNF48Q96MX3 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ZNF48Q96MX3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ZNF48Q96MX3 SPRR2C-201ENST00000290702 219 ntBASIC3.52□□□□□ -1.85
ZNF48Q96MX3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.52□□□□□ -1.85
ZNF48Q96MX3 MIR372-201ENST00000362225 67 ntBASIC3.52□□□□□ -1.85
ZNF48Q96MX3 SNORD74.4-201ENST00000364129 80 ntBASIC3.52□□□□□ -1.85
ZNF48Q96MX3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.52□□□□□ -1.85
ZNF48Q96MX3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ZNF48Q96MX3 RNU6-1029P-201ENST00000384109 107 ntBASIC3.52□□□□□ -1.85
ZNF48Q96MX3 RNU6-339P-201ENST00000384310 107 ntBASIC3.52□□□□□ -1.85
ZNF48Q96MX3 RNU6-837P-201ENST00000391056 108 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms