Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC090337.1-201ENST00000579651 2074 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
ERCC4Q92889 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.45□□□□□ -1.7
ERCC4Q92889 AC103710.2-202ENST00000641454 2853 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ERCC4Q92889 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
ERCC4Q92889 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ERCC4Q92889 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ERCC4Q92889 NCAPGP1-201ENST00000505112 1814 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ERCC4Q92889 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
ERCC4Q92889 RNU4-66P-201ENST00000365199 138 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 RNU6-1227P-201ENST00000383981 107 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 SOD2P1-201ENST00000396543 562 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 AL359634.1-202ENST00000404721 284 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 TXNP7-201ENST00000406296 293 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 AL606923.1-201ENST00000406616 190 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 RN7SKP140-201ENST00000411196 284 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 BX323014.1-201ENST00000412876 237 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 OR6C66P-201ENST00000414917 930 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.45□□□□□ -1.7
ERCC4Q92889 RSL24D1P6-201ENST00000426934 401 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 SAR1AP4-201ENST00000429225 591 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.45□□□□□ -1.7
ERCC4Q92889 HMGB1P18-201ENST00000438801 619 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 MTCO3P45-201ENST00000443036 613 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 AL118496.2-201ENST00000448300 230 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 AL590639.1-201ENST00000456484 337 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 AL136097.1-201ENST00000456945 913 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.45□□□□□ -1.7
ERCC4Q92889 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.45□□□□□ -1.7
ERCC4Q92889 RPL7P19-201ENST00000469948 618 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.45□□□□□ -1.7
ERCC4Q92889 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.45□□□□□ -1.7
ERCC4Q92889 BTF3L4P4-201ENST00000506381 449 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.45□□□□□ -1.7
ERCC4Q92889 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.45□□□□□ -1.7
ERCC4Q92889 RPL7P20-201ENST00000520308 745 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.45□□□□□ -1.7
ERCC4Q92889 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.45□□□□□ -1.7
ERCC4Q92889 AL118558.2-201ENST00000556294 238 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 MIR3939-201ENST00000582614 106 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.45□□□□□ -1.7
ERCC4Q92889 AC005498.1-201ENST00000592125 465 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 IPO5P1-202ENST00000600039 287 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.45□□□□□ -1.7
ERCC4Q92889 AC113139.1-201ENST00000605049 239 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 AC004696.1-201ENST00000614345 607 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 AL731566.2-201ENST00000618971 317 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 RMST_7.1-201ENST00000621935 268 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.45□□□□□ -1.7
ERCC4Q92889 AL137003.2-201ENST00000606924 2538 ntBASIC4.45□□□□□ -1.7
ERCC4Q92889 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.45□□□□□ -1.7
ERCC4Q92889 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ERCC4Q92889 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ERCC4Q92889 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ERCC4Q92889 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
ERCC4Q92889 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ERCC4Q92889 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ERCC4Q92889 Y_RNA.58-201ENST00000362807 102 ntBASIC4.44□□□□□ -1.7
ERCC4Q92889 Y_RNA.154-201ENST00000363624 102 ntBASIC4.44□□□□□ -1.7
ERCC4Q92889 RNY3P1-201ENST00000365085 102 ntBASIC4.44□□□□□ -1.7
ERCC4Q92889 RNY3-201ENST00000365484 102 ntBASIC4.44□□□□□ -1.7
ERCC4Q92889 Y_RNA.490-201ENST00000384413 102 ntBASIC4.44□□□□□ -1.7
ERCC4Q92889 RNU4-78P-201ENST00000410940 126 ntBASIC4.44□□□□□ -1.7
ERCC4Q92889 NDUFB4P5-201ENST00000415445 361 ntBASIC4.44□□□□□ -1.7
ERCC4Q92889 UBE2FP1-201ENST00000416536 447 ntBASIC4.44□□□□□ -1.7
ERCC4Q92889 ARL5AP1-201ENST00000418991 388 ntBASIC4.44□□□□□ -1.7
ERCC4Q92889 HSPE1P1-201ENST00000421494 318 ntBASIC4.44□□□□□ -1.7
ERCC4Q92889 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.44□□□□□ -1.7
ERCC4Q92889 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.44□□□□□ -1.7
ERCC4Q92889 RANP8-201ENST00000444720 713 ntBASIC4.44□□□□□ -1.7
ERCC4Q92889 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ERCC4Q92889 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.44□□□□□ -1.7
ERCC4Q92889 RNU7-66P-201ENST00000459469 62 ntBASIC4.44□□□□□ -1.7
ERCC4Q92889 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.44□□□□□ -1.7
ERCC4Q92889 UQCRHP4-201ENST00000471686 272 ntBASIC4.44□□□□□ -1.7
ERCC4Q92889 RPS27AP13-201ENST00000498403 237 ntBASIC4.44□□□□□ -1.7
ERCC4Q92889 CCDC34P1-201ENST00000507441 517 ntBASIC4.44□□□□□ -1.7
ERCC4Q92889 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ERCC4Q92889 SCARNA15.1-201ENST00000516384 125 ntBASIC4.44□□□□□ -1.7
ERCC4Q92889 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
ERCC4Q92889 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.44□□□□□ -1.7
ERCC4Q92889 AC005255.1-201ENST00000593748 216 ntBASIC4.44□□□□□ -1.7
ERCC4Q92889 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.44□□□□□ -1.7
ERCC4Q92889 AC093913.1-201ENST00000614178 329 ntBASIC4.44□□□□□ -1.7
ERCC4Q92889 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
ERCC4Q92889 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.44□□□□□ -1.7
ERCC4Q92889 DDX10P1-201ENST00000448545 1933 ntBASIC4.44□□□□□ -1.7
ERCC4Q92889 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ERCC4Q92889 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.44□□□□□ -1.7
ERCC4Q92889 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
ERCC4Q92889 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
ERCC4Q92889 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ERCC4Q92889 IPO8P1-201ENST00000455509 3109 ntBASIC4.43□□□□□ -1.7
ERCC4Q92889 Y_RNA.576-201ENST00000384781 102 ntBASIC4.43□□□□□ -1.7
ERCC4Q92889 UBE2V1P2-201ENST00000397758 440 ntBASIC4.43□□□□□ -1.7
ERCC4Q92889 RNU6-712P-201ENST00000410558 100 ntBASIC4.43□□□□□ -1.7
ERCC4Q92889 AL137014.1-201ENST00000420490 1226 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms