Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYNE4Q8N205 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SYNE4Q8N205 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.36□□□□□ -1.71
SYNE4Q8N205 RIOK3P1-201ENST00000418778 1528 ntBASIC4.36□□□□□ -1.71
SYNE4Q8N205 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.36□□□□□ -1.71
SYNE4Q8N205 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.36□□□□□ -1.71
SYNE4Q8N205 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SYNE4Q8N205 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SYNE4Q8N205 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SYNE4Q8N205 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SYNE4Q8N205 AC006504.1-201ENST00000562493 3666 ntBASIC4.35□□□□□ -1.71
SYNE4Q8N205 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.35□□□□□ -1.71
SYNE4Q8N205 Y_RNA.216-201ENST00000364205 93 ntBASIC4.35□□□□□ -1.71
SYNE4Q8N205 SNORA32.2-201ENST00000384049 122 ntBASIC4.35□□□□□ -1.71
SYNE4Q8N205 RN7SKP284-201ENST00000411002 343 ntBASIC4.35□□□□□ -1.71
SYNE4Q8N205 RPL35AP12-201ENST00000425362 338 ntBASIC4.35□□□□□ -1.71
SYNE4Q8N205 MTCO3P46-201ENST00000425787 232 ntBASIC4.35□□□□□ -1.71
SYNE4Q8N205 BX276092.4-201ENST00000452056 248 ntBASIC4.35□□□□□ -1.71
SYNE4Q8N205 Y_RNA.632-201ENST00000459189 102 ntBASIC4.35□□□□□ -1.71
SYNE4Q8N205 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.35□□□□□ -1.71
SYNE4Q8N205 MTND4P17-201ENST00000470444 350 ntBASIC4.35□□□□□ -1.71
SYNE4Q8N205 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.35□□□□□ -1.71
SYNE4Q8N205 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.35□□□□□ -1.71
SYNE4Q8N205 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.35□□□□□ -1.71
SYNE4Q8N205 RN7SKP209-201ENST00000516888 304 ntBASIC4.35□□□□□ -1.71
SYNE4Q8N205 RN7SKP277-201ENST00000516895 283 ntBASIC4.35□□□□□ -1.71
SYNE4Q8N205 MIR4325-201ENST00000583049 90 ntBASIC4.35□□□□□ -1.71
SYNE4Q8N205 UBE2L4-201ENST00000587688 464 ntBASIC4.35□□□□□ -1.71
SYNE4Q8N205 AC025588.3-201ENST00000604182 274 ntBASIC4.35□□□□□ -1.71
SYNE4Q8N205 AP000942.4-201ENST00000604811 241 ntBASIC4.35□□□□□ -1.71
SYNE4Q8N205 AC079597.1-201ENST00000624306 508 ntBASIC4.35□□□□□ -1.71
SYNE4Q8N205 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SYNE4Q8N205 AC090229.1-201ENST00000590983 1609 ntBASIC4.35□□□□□ -1.71
SYNE4Q8N205 AL353743.1-202ENST00000431724 1695 ntBASIC4.35□□□□□ -1.71
SYNE4Q8N205 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.35□□□□□ -1.71
SYNE4Q8N205 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SYNE4Q8N205 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SYNE4Q8N205 RNU6-1120P-201ENST00000362988 108 ntBASIC4.34□□□□□ -1.71
SYNE4Q8N205 SNORD82-201ENST00000365530 70 ntBASIC4.34□□□□□ -1.71
SYNE4Q8N205 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SYNE4Q8N205 RPL31P2-201ENST00000413849 377 ntBASIC4.34□□□□□ -1.71
SYNE4Q8N205 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.34□□□□□ -1.71
SYNE4Q8N205 NDUFB4P5-201ENST00000415445 361 ntBASIC4.34□□□□□ -1.71
SYNE4Q8N205 AC006548.1-201ENST00000427470 102 ntBASIC4.34□□□□□ -1.71
SYNE4Q8N205 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.34□□□□□ -1.71
SYNE4Q8N205 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.34□□□□□ -1.71
SYNE4Q8N205 AL136380.1-201ENST00000447970 162 ntBASIC4.34□□□□□ -1.71
SYNE4Q8N205 AL121877.1-201ENST00000453704 622 ntBASIC4.34□□□□□ -1.71
SYNE4Q8N205 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.34□□□□□ -1.71
SYNE4Q8N205 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.34□□□□□ -1.71
SYNE4Q8N205 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.34□□□□□ -1.71
SYNE4Q8N205 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.34□□□□□ -1.71
SYNE4Q8N205 AC093677.1-201ENST00000514414 678 ntBASIC4.34□□□□□ -1.71
SYNE4Q8N205 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.34□□□□□ -1.71
SYNE4Q8N205 SCARNA24.1-201ENST00000516465 137 ntBASIC4.34□□□□□ -1.71
SYNE4Q8N205 RN7SKP116-201ENST00000516902 319 ntBASIC4.34□□□□□ -1.71
SYNE4Q8N205 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.34□□□□□ -1.71
SYNE4Q8N205 AL121821.2-201ENST00000556081 394 ntBASIC4.34□□□□□ -1.71
SYNE4Q8N205 AL356432.3-201ENST00000568952 465 ntBASIC4.34□□□□□ -1.71
SYNE4Q8N205 MIR5680-201ENST00000577577 84 ntBASIC4.34□□□□□ -1.71
SYNE4Q8N205 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.34□□□□□ -1.71
SYNE4Q8N205 AC067852.4-201ENST00000590314 478 ntBASIC4.34□□□□□ -1.71
SYNE4Q8N205 RPL23AP92-201ENST00000603609 255 ntBASIC4.34□□□□□ -1.71
SYNE4Q8N205 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.34□□□□□ -1.71
SYNE4Q8N205 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.34□□□□□ -1.71
SYNE4Q8N205 CR381572.1-201ENST00000625098 102 ntBASIC4.34□□□□□ -1.71
SYNE4Q8N205 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.34□□□□□ -1.71
SYNE4Q8N205 AL732372.2-225ENST00000642124 456 ntBASIC4.34□□□□□ -1.71
SYNE4Q8N205 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SYNE4Q8N205 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
SYNE4Q8N205 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.72
SYNE4Q8N205 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SYNE4Q8N205 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
SYNE4Q8N205 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.33□□□□□ -1.72
SYNE4Q8N205 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.33□□□□□ -1.72
SYNE4Q8N205 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SYNE4Q8N205 AC006020.1-201ENST00000420179 1854 ntBASIC4.33□□□□□ -1.72
SYNE4Q8N205 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.33□□□□□ -1.72
SYNE4Q8N205 RNU6-301P-201ENST00000384277 107 ntBASIC4.33□□□□□ -1.72
SYNE4Q8N205 RNU6-606P-201ENST00000384721 111 ntBASIC4.33□□□□□ -1.72
SYNE4Q8N205 RN7SKP32-201ENST00000410167 303 ntBASIC4.33□□□□□ -1.72
SYNE4Q8N205 RNU2-8P-201ENST00000410727 190 ntBASIC4.33□□□□□ -1.72
SYNE4Q8N205 RPL21P109-201ENST00000422213 475 ntBASIC4.33□□□□□ -1.72
SYNE4Q8N205 COTL1P1-201ENST00000422309 375 ntBASIC4.33□□□□□ -1.72
SYNE4Q8N205 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.33□□□□□ -1.72
SYNE4Q8N205 HSPE1P28-201ENST00000443139 211 ntBASIC4.33□□□□□ -1.72
SYNE4Q8N205 S100A11P2-201ENST00000467589 312 ntBASIC4.33□□□□□ -1.72
SYNE4Q8N205 RPS26P15-201ENST00000488067 348 ntBASIC4.33□□□□□ -1.72
SYNE4Q8N205 RPL21P13-201ENST00000488305 481 ntBASIC4.33□□□□□ -1.72
SYNE4Q8N205 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.33□□□□□ -1.72
SYNE4Q8N205 HMGB1P21-201ENST00000502313 581 ntBASIC4.33□□□□□ -1.72
SYNE4Q8N205 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.33□□□□□ -1.72
SYNE4Q8N205 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SYNE4Q8N205 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.33□□□□□ -1.72
SYNE4Q8N205 RN7SKP82-201ENST00000516786 223 ntBASIC4.33□□□□□ -1.72
SYNE4Q8N205 RNU6-579P-201ENST00000516879 102 ntBASIC4.33□□□□□ -1.72
SYNE4Q8N205 RNA5SP337-201ENST00000517007 109 ntBASIC4.33□□□□□ -1.72
SYNE4Q8N205 NARSP2-201ENST00000518524 679 ntBASIC4.33□□□□□ -1.72
SYNE4Q8N205 MIR4742-201ENST00000581069 85 ntBASIC4.33□□□□□ -1.72
SYNE4Q8N205 AL451007.1-201ENST00000595491 289 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms