Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 RNA5SP311-201ENST00000411290 116 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.27□□□□□ -1.89
SHFQ7M4L6 GTF2IP20-201ENST00000431663 360 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 RPL36AP6-201ENST00000435770 321 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 MTCO2P3-201ENST00000442543 421 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.27□□□□□ -1.89
SHFQ7M4L6 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.27□□□□□ -1.89
SHFQ7M4L6 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.27□□□□□ -1.89
SHFQ7M4L6 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.27□□□□□ -1.89
SHFQ7M4L6 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.27□□□□□ -1.89
SHFQ7M4L6 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.27□□□□□ -1.89
SHFQ7M4L6 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.27□□□□□ -1.89
SHFQ7M4L6 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.27□□□□□ -1.89
SHFQ7M4L6 RPS29P15-201ENST00000458329 171 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 RNU6-261P-201ENST00000459506 102 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 AL049874.1-201ENST00000489560 388 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 RN7SL323P-201ENST00000494712 295 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 AC116353.2-201ENST00000505332 712 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.27□□□□□ -1.89
SHFQ7M4L6 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.27□□□□□ -1.89
SHFQ7M4L6 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.27□□□□□ -1.89
SHFQ7M4L6 RN7SKP122-201ENST00000515923 296 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 RNA5SP315-201ENST00000516340 116 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 SCARNA14-201ENST00000516903 136 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 RNA5SP312-201ENST00000517068 116 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 NRON-201ENST00000517270 370 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.27□□□□□ -1.89
SHFQ7M4L6 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.27□□□□□ -1.89
SHFQ7M4L6 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.27□□□□□ -1.89
SHFQ7M4L6 AL355836.1-201ENST00000555951 870 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.27□□□□□ -1.89
SHFQ7M4L6 NCAPGP2-201ENST00000557911 754 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 MIR3690-201ENST00000580266 75 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.27□□□□□ -1.89
SHFQ7M4L6 MIR4775-201ENST00000581168 75 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 AC067852.3-201ENST00000589177 561 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 BDH2P1-201ENST00000602288 736 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 AL162413.1-201ENST00000603198 110 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 AL049634.3-201ENST00000604968 457 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.27□□□□□ -1.89
SHFQ7M4L6 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
SHFQ7M4L6 AC002553.4-201ENST00000616896 331 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SHFQ7M4L6 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
SHFQ7M4L6 FER-210ENST00000628534 558 ntTSL 5 BASIC3.27□□□□□ -1.89
SHFQ7M4L6 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.27□□□□□ -1.89
SHFQ7M4L6 U6.98-201ENST00000637157 84 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.27□□□□□ -1.89
SHFQ7M4L6 AP000553.6-201ENST00000641242 118 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.27□□□□□ -1.89
SHFQ7M4L6 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SHFQ7M4L6 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SHFQ7M4L6 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHFQ7M4L6 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SHFQ7M4L6 AC004520.1-201ENST00000608362 1413 ntBASIC3.27□□□□□ -1.89
SHFQ7M4L6 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.26□□□□□ -1.89
SHFQ7M4L6 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
SHFQ7M4L6 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
SHFQ7M4L6 MTND5P17-201ENST00000418405 1603 ntBASIC3.26□□□□□ -1.89
SHFQ7M4L6 SDAD1P2-201ENST00000441308 2028 ntBASIC3.26□□□□□ -1.89
SHFQ7M4L6 OR4G2P-202ENST00000641004 1759 ntBASIC3.26□□□□□ -1.89
SHFQ7M4L6 RNU6-61P-201ENST00000365528 109 ntBASIC3.26□□□□□ -1.89
SHFQ7M4L6 RNU6-14P-201ENST00000384630 106 ntBASIC3.26□□□□□ -1.89
SHFQ7M4L6 MIR514A1-201ENST00000385133 98 ntBASIC3.26□□□□□ -1.89
SHFQ7M4L6 RN7SKP140-201ENST00000411196 284 ntBASIC3.26□□□□□ -1.89
SHFQ7M4L6 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.26□□□□□ -1.89
SHFQ7M4L6 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SHFQ7M4L6 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.26□□□□□ -1.89
SHFQ7M4L6 ZNF90P2-204ENST00000419323 1075 ntBASIC3.26□□□□□ -1.89
SHFQ7M4L6 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.26□□□□□ -1.89
SHFQ7M4L6 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.26□□□□□ -1.89
SHFQ7M4L6 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.26□□□□□ -1.89
SHFQ7M4L6 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.26□□□□□ -1.89
SHFQ7M4L6 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.26□□□□□ -1.89
SHFQ7M4L6 HSFY6P-201ENST00000445573 403 ntBASIC3.26□□□□□ -1.89
SHFQ7M4L6 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.26□□□□□ -1.89
SHFQ7M4L6 AC078785.3-201ENST00000476607 425 ntBASIC3.26□□□□□ -1.89
SHFQ7M4L6 RPS29P25-201ENST00000481709 171 ntBASIC3.26□□□□□ -1.89
SHFQ7M4L6 RN7SKP258-201ENST00000517151 304 ntBASIC3.26□□□□□ -1.89
SHFQ7M4L6 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.26□□□□□ -1.89
SHFQ7M4L6 OR5AL2P-201ENST00000532185 920 ntBASIC3.26□□□□□ -1.89
SHFQ7M4L6 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.26□□□□□ -1.89
SHFQ7M4L6 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.26□□□□□ -1.89
SHFQ7M4L6 AC055876.1-202ENST00000567053 138 ntBASIC3.26□□□□□ -1.89
SHFQ7M4L6 AC007448.1-201ENST00000582714 234 ntBASIC3.26□□□□□ -1.89
SHFQ7M4L6 AP001029.3-201ENST00000588063 596 ntBASIC3.26□□□□□ -1.89
SHFQ7M4L6 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.26□□□□□ -1.89
SHFQ7M4L6 BNIP3P30-201ENST00000601184 574 ntBASIC3.26□□□□□ -1.89
SHFQ7M4L6 AC005344.1-201ENST00000613391 459 ntBASIC3.26□□□□□ -1.89
SHFQ7M4L6 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.26□□□□□ -1.89
SHFQ7M4L6 AL354950.2-201ENST00000617939 290 ntBASIC3.26□□□□□ -1.89
SHFQ7M4L6 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SHFQ7M4L6 YWHAEP7-203ENST00000622054 312 ntBASIC3.26□□□□□ -1.89
SHFQ7M4L6 AC025034.2-201ENST00000623264 286 ntBASIC3.26□□□□□ -1.89
SHFQ7M4L6 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.26□□□□□ -1.89
SHFQ7M4L6 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.26□□□□□ -1.89
SHFQ7M4L6 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.26□□□□□ -1.89
SHFQ7M4L6 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SHFQ7M4L6 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SHFQ7M4L6 AL137003.2-201ENST00000606924 2538 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms