Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.71□□□□□ -2.3
VPS13CQ709C8 AC112198.4-201ENST00000515450 351 ntBASIC0.71□□□□□ -2.3
VPS13CQ709C8 RNU1-104P-201ENST00000517280 175 ntBASIC0.71□□□□□ -2.3
VPS13CQ709C8 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC0.71□□□□□ -2.3
VPS13CQ709C8 AC068446.3-201ENST00000555285 382 ntBASIC0.71□□□□□ -2.3
VPS13CQ709C8 XIST_intron.1-201ENST00000619444 68 ntBASIC0.71□□□□□ -2.3
VPS13CQ709C8 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC0.71□□□□□ -2.3
VPS13CQ709C8 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC0.71□□□□□ -2.3
VPS13CQ709C8 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC0.71□□□□□ -2.3
VPS13CQ709C8 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.71□□□□□ -2.3
VPS13CQ709C8 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.71□□□□□ -2.3
VPS13CQ709C8 AC146944.4-201ENST00000602697 718 ntBASIC0.71□□□□□ -2.3
VPS13CQ709C8 RNU1-62P-201ENST00000362599 164 ntBASIC0.7□□□□□ -2.3
VPS13CQ709C8 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
VPS13CQ709C8 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
VPS13CQ709C8 AC010625.1-201ENST00000511296 403 ntBASIC0.7□□□□□ -2.3
VPS13CQ709C8 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC0.7□□□□□ -2.3
VPS13CQ709C8 UBE2L4-201ENST00000587688 464 ntBASIC0.7□□□□□ -2.3
VPS13CQ709C8 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC0.7□□□□□ -2.3
VPS13CQ709C8 ELL2P3-201ENST00000457883 1602 ntBASIC0.7□□□□□ -2.3
VPS13CQ709C8 RNU1-109P-201ENST00000383960 147 ntBASIC0.7□□□□□ -2.3
VPS13CQ709C8 AC092754.2-201ENST00000463506 460 ntBASIC0.7□□□□□ -2.3
VPS13CQ709C8 AC005908.1-201ENST00000468701 347 ntBASIC0.7□□□□□ -2.3
VPS13CQ709C8 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC0.7□□□□□ -2.3
VPS13CQ709C8 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.7□□□□□ -2.3
VPS13CQ709C8 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC0.7□□□□□ -2.3
VPS13CQ709C8 DPRXP5-201ENST00000604662 539 ntBASIC0.7□□□□□ -2.3
VPS13CQ709C8 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
VPS13CQ709C8 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
VPS13CQ709C8 Y_RNA.324-201ENST00000365165 102 ntBASIC0.7□□□□□ -2.3
VPS13CQ709C8 RPL23AP32-201ENST00000395315 459 ntBASIC0.7□□□□□ -2.3
VPS13CQ709C8 MIR1912-201ENST00000410389 80 ntBASIC0.7□□□□□ -2.3
VPS13CQ709C8 Z75741.2-201ENST00000417272 1167 ntBASIC0.7□□□□□ -2.3
VPS13CQ709C8 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC0.7□□□□□ -2.3
VPS13CQ709C8 SNORD97-201ENST00000459187 142 ntBASIC0.7□□□□□ -2.3
VPS13CQ709C8 AC067942.3-201ENST00000512025 362 ntBASIC0.7□□□□□ -2.3
VPS13CQ709C8 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
VPS13CQ709C8 AC091057.2-201ENST00000602594 792 ntBASIC0.7□□□□□ -2.3
VPS13CQ709C8 HMGB3P30-201ENST00000457863 606 ntBASIC0.69□□□□□ -2.3
VPS13CQ709C8 HMGB3P31-201ENST00000413333 595 ntBASIC0.69□□□□□ -2.3
VPS13CQ709C8 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.69□□□□□ -2.3
VPS13CQ709C8 AL357134.1-201ENST00000445848 426 ntBASIC0.69□□□□□ -2.3
VPS13CQ709C8 AC146507.1-201ENST00000468335 354 ntBASIC0.69□□□□□ -2.3
VPS13CQ709C8 AC074029.2-201ENST00000551045 634 ntBASIC0.69□□□□□ -2.3
VPS13CQ709C8 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC0.69□□□□□ -2.3
VPS13CQ709C8 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
VPS13CQ709C8 RNA5SP167-201ENST00000365461 116 ntBASIC0.69□□□□□ -2.3
VPS13CQ709C8 MIR1265-201ENST00000408444 86 ntBASIC0.69□□□□□ -2.3
VPS13CQ709C8 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.69□□□□□ -2.3
VPS13CQ709C8 HMGN1P10-201ENST00000474557 553 ntBASIC0.69□□□□□ -2.3
VPS13CQ709C8 SNORA2A-201ENST00000383885 135 ntBASIC0.68□□□□□ -2.3
VPS13CQ709C8 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC0.68□□□□□ -2.3
VPS13CQ709C8 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.68□□□□□ -2.3
VPS13CQ709C8 BOLA3P3-201ENST00000505182 232 ntBASIC0.68□□□□□ -2.3
VPS13CQ709C8 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
VPS13CQ709C8 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.68□□□□□ -2.3
VPS13CQ709C8 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC0.68□□□□□ -2.3
VPS13CQ709C8 UBE2V2P1-201ENST00000434717 398 ntBASIC0.68□□□□□ -2.3
VPS13CQ709C8 AC125611.2-201ENST00000551907 647 ntBASIC0.68□□□□□ -2.3
VPS13CQ709C8 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.68□□□□□ -2.3
VPS13CQ709C8 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC0.68□□□□□ -2.3
VPS13CQ709C8 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC0.68□□□□□ -2.3
VPS13CQ709C8 AC104472.2-201ENST00000469035 601 ntBASIC0.68□□□□□ -2.3
VPS13CQ709C8 RNU2-44P-201ENST00000516795 194 ntBASIC0.68□□□□□ -2.3
VPS13CQ709C8 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.68□□□□□ -2.3
VPS13CQ709C8 AC048347.1-201ENST00000624621 427 ntBASIC0.68□□□□□ -2.3
VPS13CQ709C8 AC007785.2-201ENST00000598627 1916 ntBASIC0.67□□□□□ -2.3
VPS13CQ709C8 AC010889.1-201ENST00000566193 2666 ntBASIC0.67□□□□□ -2.3
VPS13CQ709C8 AC092745.2-202ENST00000411880 369 ntBASIC0.67□□□□□ -2.3
VPS13CQ709C8 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.67□□□□□ -2.3
VPS13CQ709C8 AL031663.1-201ENST00000437445 219 ntBASIC0.67□□□□□ -2.3
VPS13CQ709C8 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.67□□□□□ -2.3
VPS13CQ709C8 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.67□□□□□ -2.3
VPS13CQ709C8 RNA5SP276-201ENST00000362580 94 ntBASIC0.67□□□□□ -2.3
VPS13CQ709C8 SNORA6-201ENST00000384033 151 ntBASIC0.67□□□□□ -2.3
VPS13CQ709C8 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
VPS13CQ709C8 AL391261.3-201ENST00000557194 520 ntBASIC0.67□□□□□ -2.3
VPS13CQ709C8 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.67□□□□□ -2.3
VPS13CQ709C8 HMGB1P24-202ENST00000615653 685 ntBASIC0.67□□□□□ -2.3
VPS13CQ709C8 AC067863.3-201ENST00000624172 122 ntBASIC0.67□□□□□ -2.3
VPS13CQ709C8 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
VPS13CQ709C8 MTND5P11-201ENST00000511037 1812 ntBASIC0.67□□□□□ -2.3
VPS13CQ709C8 AL589743.1-201ENST00000551932 2712 ntBASIC0.67□□□□□ -2.3
VPS13CQ709C8 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC0.67□□□□□ -2.3
VPS13CQ709C8 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
VPS13CQ709C8 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC0.67□□□□□ -2.3
VPS13CQ709C8 RNU6-351P-201ENST00000516097 100 ntBASIC0.67□□□□□ -2.3
VPS13CQ709C8 AC243829.6-201ENST00000612652 106 ntBASIC0.67□□□□□ -2.3
VPS13CQ709C8 AC126177.8-201ENST00000618339 1015 ntBASIC0.67□□□□□ -2.3
VPS13CQ709C8 AC121333.1-201ENST00000567488 2709 ntBASIC0.66□□□□□ -2.3
VPS13CQ709C8 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.66□□□□□ -2.3
VPS13CQ709C8 RNU2-40P-201ENST00000410833 196 ntBASIC0.66□□□□□ -2.3
VPS13CQ709C8 RNU2-41P-201ENST00000410991 178 ntBASIC0.66□□□□□ -2.3
VPS13CQ709C8 SDCBPP1-201ENST00000440192 890 ntBASIC0.66□□□□□ -2.3
VPS13CQ709C8 AC234775.1-201ENST00000454247 670 ntBASIC0.66□□□□□ -2.3
VPS13CQ709C8 RN7SKP179-201ENST00000516126 217 ntBASIC0.66□□□□□ -2.3
VPS13CQ709C8 AC104997.1-201ENST00000519761 717 ntBASIC0.66□□□□□ -2.3
VPS13CQ709C8 AP003484.1-201ENST00000530974 250 ntBASIC0.66□□□□□ -2.3
VPS13CQ709C8 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC0.66□□□□□ -2.3
VPS13CQ709C8 AP000254.1-201ENST00000609934 520 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms