Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 Y_RNA.152-201ENST00000363578 100 ntBASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 Y_RNA.380-201ENST00000365663 111 ntBASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 SNORA70E-201ENST00000384492 135 ntBASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 RNU2-3P-201ENST00000410144 191 ntBASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 RPS15AP10-201ENST00000432472 382 ntBASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 RPS20P1-201ENST00000434853 354 ntBASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 AC006466.1-201ENST00000438721 289 ntBASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 AC011816.1-201ENST00000441346 546 ntBASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 DYNLT3P2-201ENST00000442517 295 ntBASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 AL590399.6-201ENST00000446396 307 ntBASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 RPL7L1P1-201ENST00000448259 785 ntBASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 PCMTD1P1-201ENST00000455560 355 ntBASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 AC008571.1-201ENST00000467232 300 ntBASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 AC007686.1-201ENST00000488511 463 ntBASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 MTND3P25-201ENST00000509243 135 ntBASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 RNU1-6P-201ENST00000516290 144 ntBASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 RNY3P15-201ENST00000516297 97 ntBASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 AC009643.1-201ENST00000532030 391 ntBASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 SUB1P3-201ENST00000564581 315 ntBASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 AC005951.2-201ENST00000576282 495 ntBASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 FAM25E-202ENST00000608562 189 ntBASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 Mico1.1-201ENST00000611698 204 ntBASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RNF111Q6ZNA4 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
RNF111Q6ZNA4 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.46□□□□□ -1.69
RNF111Q6ZNA4 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
RNF111Q6ZNA4 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 RNA5SP191-201ENST00000362585 102 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 Y_RNA.48-201ENST00000362710 103 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 Y_RNA.489-201ENST00000384410 101 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 RNU6-1026P-201ENST00000384465 108 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 MIR513A2-201ENST00000385249 127 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 AC097374.1-203ENST00000400783 485 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 RN7SKP216-201ENST00000411050 312 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 RNA5SP39-201ENST00000411245 120 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 RPL7AP73-201ENST00000413490 353 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 BX276092.3-201ENST00000424182 230 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 RPL21P91-201ENST00000429231 479 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 HMGB1P27-201ENST00000431429 603 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 AL353997.1-201ENST00000432936 108 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 CKS1BP5-201ENST00000434172 273 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 AC073063.1-201ENST00000434352 607 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 AL121871.1-201ENST00000443413 436 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 OSTCP8-201ENST00000445117 448 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 AL589765.3-201ENST00000446084 462 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 PRDX3P3-201ENST00000447765 522 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 AC108860.1-201ENST00000484521 383 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 PPBPP1-201ENST00000510807 373 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 SNORA31.3-201ENST00000516029 96 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 RNU6-1143P-201ENST00000516125 104 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 AC008694.2-201ENST00000517591 306 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 AC069113.1-201ENST00000517763 267 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 AC022616.4-201ENST00000522985 181 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 AP001880.2-201ENST00000538233 448 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 MIR5699-201ENST00000578903 90 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 MIR5692A1-201ENST00000580523 69 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 MIR4737-201ENST00000583979 81 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 AL021879.1-201ENST00000611756 288 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 U73479.1-201ENST00000618062 168 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 AC078938.1-201ENST00000620993 318 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 AL031601.2-202ENST00000622650 282 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 AC091953.3-201ENST00000623220 236 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 AL136164.3-201ENST00000624429 3978 ntBASIC4.46□□□□□ -1.7
RNF111Q6ZNA4 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms