Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNFT1Q5M7Z0 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 MTND5P32-201ENST00000560711 1802 ntBASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-227P-201ENST00000362865 103 ntBASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 RNA5SP197-201ENST00000363357 119 ntBASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-879P-201ENST00000364328 108 ntBASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 Y_RNA.369-201ENST00000365568 117 ntBASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 GNG5P2-201ENST00000372054 207 ntBASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 SNORA22-201ENST00000383907 134 ntBASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 AL645927.1-201ENST00000396783 406 ntBASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 TBCAP2-201ENST00000416175 326 ntBASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 RNF10P1-201ENST00000418589 369 ntBASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 GNG5P5-201ENST00000420444 220 ntBASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 AC108075.1-201ENST00000424692 529 ntBASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 AP000907.1-201ENST00000428428 510 ntBASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 TMEM183AP1-205ENST00000432739 290 ntBASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 AC009237.7-201ENST00000447357 229 ntBASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 BX284632.1-201ENST00000478218 541 ntBASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 MIR3691-201ENST00000578066 90 ntBASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 MIR4431-201ENST00000579990 94 ntBASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 AC090616.3-201ENST00000582184 217 ntBASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 AC060766.3-201ENST00000591442 263 ntBASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 SRGNP1-201ENST00000603392 451 ntBASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 AC006001.4-201ENST00000622243 395 ntBASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
RNFT1Q5M7Z0 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 IQCB2P-201ENST00000401788 1633 ntBASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 AL359955.1-201ENST00000455242 3275 ntBASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 Y_RNA.123-201ENST00000363338 102 ntBASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-626P-201ENST00000363354 107 ntBASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 RNA5SP507-201ENST00000363603 121 ntBASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-263P-201ENST00000363811 107 ntBASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-512P-201ENST00000364438 103 ntBASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 MIR765-201ENST00000390226 114 ntBASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 AL592148.1-201ENST00000413568 445 ntBASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 GSTM5P1-201ENST00000434751 660 ntBASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 RPL7L1P1-201ENST00000448259 785 ntBASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 RN7SL329P-201ENST00000467740 299 ntBASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 RPSAP50-201ENST00000481955 852 ntBASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 AC022493.1-201ENST00000492984 337 ntBASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 RNU5E-3P-201ENST00000515913 68 ntBASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 AP006245.2-201ENST00000522004 300 ntBASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 HMGB1P40-201ENST00000525121 540 ntBASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 AC024940.3-201ENST00000538551 316 ntBASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 HMGN2P6-201ENST00000551091 273 ntBASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 TRAV37-201ENST00000553906 342 ntBASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 AC103996.1-201ENST00000555468 102 ntBASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 RPL10P14-201ENST00000565265 298 ntBASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 RNA5SP439-201ENST00000617595 124 ntBASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 MIR4275-201ENST00000636486 87 ntBASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 AC010266.2-201ENST00000564741 3255 ntBASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNFT1Q5M7Z0 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms