Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
MTHFRP42898 RNY4P24-201ENST00000362735 96 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 RNA5SP139-201ENST00000364340 117 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 SNORA23-201ENST00000365128 182 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
MTHFRP42898 RNU1-39P-201ENST00000383897 165 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 RNU6-754P-201ENST00000391166 107 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 SNORA26.8-201ENST00000391306 124 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 UBE2FP1-201ENST00000416536 447 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 NPM1P11-201ENST00000417106 855 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 NDUFB4P7-201ENST00000423198 363 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.29□□□□□ -1.88
MTHFRP42898 RPL35AP22-201ENST00000436855 335 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 RPL22P17-201ENST00000438729 315 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 HMGN1P18-201ENST00000457642 277 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 RPL31P60-201ENST00000478450 367 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.29□□□□□ -1.88
MTHFRP42898 AC010486.1-201ENST00000511793 424 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 RN7SKP272-201ENST00000516988 232 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 RNU6-1003P-201ENST00000517099 105 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.29□□□□□ -1.88
MTHFRP42898 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.29□□□□□ -1.88
MTHFRP42898 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.29□□□□□ -1.88
MTHFRP42898 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.29□□□□□ -1.88
MTHFRP42898 GTF3AP2-201ENST00000557014 266 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 ZNF519P3-201ENST00000557158 1032 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 HMGB1P14-201ENST00000557424 591 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.29□□□□□ -1.88
MTHFRP42898 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.29□□□□□ -1.88
MTHFRP42898 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.29□□□□□ -1.88
MTHFRP42898 MIR5697-201ENST00000578045 78 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.29□□□□□ -1.88
MTHFRP42898 MIR3609-201ENST00000582661 80 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 MIR548AB-201ENST00000584917 84 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.29□□□□□ -1.88
MTHFRP42898 Z94722.1-201ENST00000604328 474 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 HSPE1P7-201ENST00000604681 321 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 AC245008.1-201ENST00000608123 476 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 uc_338.25-201ENST00000613756 156 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 AC104010.1-201ENST00000616889 150 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 MTND5P27-201ENST00000428871 1720 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
MTHFRP42898 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
MTHFRP42898 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
MTHFRP42898 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.29□□□□□ -1.88
MTHFRP42898 DDX10P1-201ENST00000448545 1933 ntBASIC3.29□□□□□ -1.88
MTHFRP42898 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
MTHFRP42898 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
MTHFRP42898 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.28□□□□□ -1.88
MTHFRP42898 AC091564.4-201ENST00000533934 2194 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 MTND5P7-201ENST00000413558 1798 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.28□□□□□ -1.88
MTHFRP42898 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
MTHFRP42898 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
MTHFRP42898 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
MTHFRP42898 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
MTHFRP42898 RNU6-805P-201ENST00000365643 106 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 SNORA36C-201ENST00000384289 132 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 RNA5SP229-201ENST00000410809 99 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 AL356968.1-201ENST00000416622 474 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 AC090960.1-201ENST00000421072 306 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 RPL23AP82-202ENST00000427528 469 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 VN1R108P-201ENST00000431580 830 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 MTND4P32-201ENST00000437189 1237 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 ISCA1P2-201ENST00000438679 421 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.28□□□□□ -1.88
MTHFRP42898 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.28□□□□□ -1.88
MTHFRP42898 COX6CP12-201ENST00000446748 202 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 AL162389.1-201ENST00000449233 177 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.28□□□□□ -1.88
MTHFRP42898 CENPBD1P1-201ENST00000464061 469 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 RPS15AP36-201ENST00000492022 382 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.28□□□□□ -1.88
MTHFRP42898 ARL4AP2-201ENST00000507378 601 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 AC006445.2-201ENST00000510061 472 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 AC091826.1-201ENST00000514065 313 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 RNU6-840P-201ENST00000517275 65 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.28□□□□□ -1.88
MTHFRP42898 AC060788.1-201ENST00000521318 469 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.28□□□□□ -1.88
MTHFRP42898 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.28□□□□□ -1.88
MTHFRP42898 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.28□□□□□ -1.88
MTHFRP42898 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.28□□□□□ -1.88
MTHFRP42898 AL133153.1-201ENST00000557756 303 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.28□□□□□ -1.88
MTHFRP42898 PIGPP4-201ENST00000584447 307 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.28□□□□□ -1.88
MTHFRP42898 AC083760.1-201ENST00000589621 670 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 AC010620.1-201ENST00000601088 1102 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 AC007038.2-201ENST00000608095 740 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 AC004908.2-201ENST00000609090 574 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 TUG1_2.1-201ENST00000614234 87 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.28□□□□□ -1.88
MTHFRP42898 AC068137.4-201ENST00000638485 296 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 GABRG2-229ENST00000641017 3628 ntBASIC3.28□□□□□ -1.88
MTHFRP42898 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.28□□□□□ -1.88
MTHFRP42898 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
MTHFRP42898 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
MTHFRP42898 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms