Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 TRMT10BP1-201ENST00000519377 943 ntBASIC3.15□□□□□ -1.91
HLA-DOBP13765 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.15□□□□□ -1.91
HLA-DOBP13765 AC068587.5-201ENST00000528506 175 ntBASIC3.15□□□□□ -1.91
HLA-DOBP13765 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.15□□□□□ -1.91
HLA-DOBP13765 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.15□□□□□ -1.91
HLA-DOBP13765 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.15□□□□□ -1.91
HLA-DOBP13765 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DOBP13765 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.15□□□□□ -1.91
HLA-DOBP13765 MIR548S-201ENST00000581352 82 ntBASIC3.15□□□□□ -1.91
HLA-DOBP13765 AC006130.2-201ENST00000586202 326 ntBASIC3.15□□□□□ -1.91
HLA-DOBP13765 AC008752.3-201ENST00000588113 712 ntBASIC3.15□□□□□ -1.91
HLA-DOBP13765 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DOBP13765 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DOBP13765 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
HLA-DOBP13765 AC039056.2-201ENST00000622261 511 ntBASIC3.15□□□□□ -1.91
HLA-DOBP13765 AL008636.1-201ENST00000625038 1018 ntBASIC3.15□□□□□ -1.91
HLA-DOBP13765 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DOBP13765 AC099654.14-201ENST00000638599 341 ntBASIC3.15□□□□□ -1.91
HLA-DOBP13765 AC008725.1-201ENST00000605123 2263 ntBASIC3.15□□□□□ -1.91
HLA-DOBP13765 AC092326.2-201ENST00000624772 1561 ntBASIC3.15□□□□□ -1.91
HLA-DOBP13765 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DOBP13765 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DOBP13765 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
HLA-DOBP13765 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DOBP13765 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DOBP13765 PWAR6-201ENST00000552334 4618 ntBASIC3.15□□□□□ -1.91
HLA-DOBP13765 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DOBP13765 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
HLA-DOBP13765 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DOBP13765 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DOBP13765 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DOBP13765 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DOBP13765 SDAD1P2-201ENST00000441308 2028 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DOBP13765 AL359837.1-201ENST00000381357 287 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 SNORA69-201ENST00000383895 132 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 Z98941.1-201ENST00000407764 100 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 RNU6ATAC-201ENST00000408749 126 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DOBP13765 SDCBPP3-201ENST00000419629 891 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DOBP13765 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DOBP13765 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DOBP13765 MTATP6P16-201ENST00000434543 526 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 AL138799.3-201ENST00000438968 350 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 RPL26P6-201ENST00000440913 438 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DOBP13765 GAPDHP27-201ENST00000447427 1020 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 DPPA3P1-201ENST00000448050 469 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.14□□□□□ -1.91
HLA-DOBP13765 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DOBP13765 RNU7-182P-201ENST00000459009 62 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 AP000873.1-201ENST00000463987 400 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 AC002456.2-201ENST00000509356 380 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 AC023141.12-201ENST00000512399 199 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 AC105417.1-201ENST00000514691 285 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 RN7SKP18-201ENST00000516005 275 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 RNU6-840P-201ENST00000517275 65 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 AC023632.4-201ENST00000517783 191 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DOBP13765 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DOBP13765 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DOBP13765 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.14□□□□□ -1.91
HLA-DOBP13765 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DOBP13765 AC034105.3-201ENST00000565294 442 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 AC055876.1-202ENST00000567053 138 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DOBP13765 AC093227.2-201ENST00000589357 285 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.14□□□□□ -1.91
HLA-DOBP13765 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DOBP13765 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DOBP13765 AC004696.1-201ENST00000614345 607 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 SDR42E1P2-201ENST00000614861 481 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HLA-DOBP13765 AC022149.2-201ENST00000621061 203 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 YWHAEP7-203ENST00000622054 312 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 AL357559.1-201ENST00000622228 274 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 AP003355.3-201ENST00000623465 114 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 AC112200.1-201ENST00000625015 234 ntBASIC3.14□□□□□ -1.91
HLA-DOBP13765 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DOBP13765 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
HLA-DOBP13765 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DOBP13765 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DOBP13765 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
HLA-DOBP13765 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DOBP13765 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DOBP13765 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DOBP13765 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
HLA-DOBP13765 XIAPP3-201ENST00000312918 795 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 RNY3P3-201ENST00000363816 102 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 Y_RNA.381-201ENST00000365666 102 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 RNY3P14-201ENST00000384309 102 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 MIR554-201ENST00000384874 96 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 MIR134-201ENST00000385258 73 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HLA-DOBP13765 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HLA-DOBP13765 AC068533.1-201ENST00000418542 415 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 AL139413.1-201ENST00000421309 217 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.13□□□□□ -1.91
HLA-DOBP13765 AL158071.1-201ENST00000430315 461 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms