Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXD8P13378 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXD8P13378 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXD8P13378 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXD8P13378 AC008079.2-201ENST00000623543 20396 ntBASIC5.12□□□□□ -1.59
HOXD8P13378 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
HOXD8P13378 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
HOXD8P13378 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXD8P13378 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
HOXD8P13378 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXD8P13378 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
HOXD8P13378 AC026523.2-201ENST00000625039 7739 ntBASIC5.11□□□□□ -1.59
HOXD8P13378 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXD8P13378 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXD8P13378 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.11□□□□□ -1.59
HOXD8P13378 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXD8P13378 SNORD27-201ENST00000363981 72 ntBASIC5.11□□□□□ -1.59
HOXD8P13378 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXD8P13378 RNU6-146P-201ENST00000384602 108 ntBASIC5.11□□□□□ -1.59
HOXD8P13378 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HOXD8P13378 SNORA48.7-201ENST00000391302 135 ntBASIC5.11□□□□□ -1.59
HOXD8P13378 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXD8P13378 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXD8P13378 MTCO3P19-201ENST00000415864 321 ntBASIC5.11□□□□□ -1.59
HOXD8P13378 AC139712.2-201ENST00000424302 339 ntBASIC5.11□□□□□ -1.59
HOXD8P13378 CKS1BP6-201ENST00000424932 240 ntBASIC5.11□□□□□ -1.59
HOXD8P13378 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXD8P13378 AC006946.1-201ENST00000429106 328 ntBASIC5.11□□□□□ -1.59
HOXD8P13378 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXD8P13378 AL590664.1-201ENST00000448065 339 ntBASIC5.11□□□□□ -1.59
HOXD8P13378 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXD8P13378 MTND3P25-201ENST00000509243 135 ntBASIC5.11□□□□□ -1.59
HOXD8P13378 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXD8P13378 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXD8P13378 AC004584.2-201ENST00000570407 410 ntBASIC5.11□□□□□ -1.59
HOXD8P13378 AC064801.1-201ENST00000612025 407 ntBASIC5.11□□□□□ -1.59
HOXD8P13378 MIR4275-201ENST00000636486 87 ntBASIC5.11□□□□□ -1.59
HOXD8P13378 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXD8P13378 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXD8P13378 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXD8P13378 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
HOXD8P13378 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXD8P13378 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXD8P13378 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXD8P13378 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXD8P13378 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXD8P13378 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXD8P13378 STX3-208ENST00000641815 3236 ntBASIC5.1□□□□□ -1.59
HOXD8P13378 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXD8P13378 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXD8P13378 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXD8P13378 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXD8P13378 RNU6-212P-201ENST00000362642 104 ntBASIC5.1□□□□□ -1.59
HOXD8P13378 RNU6-596P-201ENST00000365395 98 ntBASIC5.1□□□□□ -1.59
HOXD8P13378 Y_RNA.471-201ENST00000384312 102 ntBASIC5.1□□□□□ -1.59
HOXD8P13378 Y_RNA.562-201ENST00000384695 113 ntBASIC5.1□□□□□ -1.59
HOXD8P13378 RNU2-43P-201ENST00000410306 190 ntBASIC5.1□□□□□ -1.59
HOXD8P13378 RNA5SP296-201ENST00000410523 111 ntBASIC5.1□□□□□ -1.59
HOXD8P13378 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.1□□□□□ -1.59
HOXD8P13378 TMSB10P2-201ENST00000416049 131 ntBASIC5.1□□□□□ -1.59
HOXD8P13378 SSXP9-201ENST00000417503 292 ntBASIC5.1□□□□□ -1.59
HOXD8P13378 RPS27AP12-201ENST00000429552 465 ntBASIC5.1□□□□□ -1.59
HOXD8P13378 RPS29P17-201ENST00000430795 166 ntBASIC5.1□□□□□ -1.59
HOXD8P13378 AL589765.3-201ENST00000446084 462 ntBASIC5.1□□□□□ -1.59
HOXD8P13378 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXD8P13378 PRDX3P3-201ENST00000447765 522 ntBASIC5.1□□□□□ -1.59
HOXD8P13378 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXD8P13378 RPL21P126-201ENST00000470049 478 ntBASIC5.1□□□□□ -1.59
HOXD8P13378 AC109327.1-201ENST00000471666 403 ntBASIC5.1□□□□□ -1.59
HOXD8P13378 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.1□□□□□ -1.59
HOXD8P13378 RN7SL810P-201ENST00000493031 276 ntBASIC5.1□□□□□ -1.59
HOXD8P13378 RPS27AP13-201ENST00000498403 237 ntBASIC5.1□□□□□ -1.59
HOXD8P13378 GMPSP1-201ENST00000514075 579 ntBASIC5.1□□□□□ -1.59
HOXD8P13378 RNU6-897P-201ENST00000517135 105 ntBASIC5.1□□□□□ -1.59
HOXD8P13378 RNU6-111P-201ENST00000517179 105 ntBASIC5.1□□□□□ -1.59
HOXD8P13378 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.1□□□□□ -1.59
HOXD8P13378 AC022790.1-201ENST00000522872 204 ntBASIC5.1□□□□□ -1.59
HOXD8P13378 AP003733.2-201ENST00000529409 171 ntBASIC5.1□□□□□ -1.59
HOXD8P13378 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXD8P13378 AC023575.1-201ENST00000580510 358 ntBASIC5.1□□□□□ -1.59
HOXD8P13378 MIR548AC-201ENST00000585049 88 ntBASIC5.1□□□□□ -1.59
HOXD8P13378 MIR3138-201ENST00000585238 82 ntBASIC5.1□□□□□ -1.59
HOXD8P13378 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.1□□□□□ -1.59
HOXD8P13378 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXD8P13378 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXD8P13378 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXD8P13378 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXD8P13378 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXD8P13378 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXD8P13378 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXD8P13378 AC104623.2-202ENST00000623477 4002 ntBASIC5.09□□□□□ -1.59
HOXD8P13378 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HOXD8P13378 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HOXD8P13378 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HOXD8P13378 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXD8P13378 OR51H2P-202ENST00000641424 3046 ntBASIC5.09□□□□□ -1.59
HOXD8P13378 RN7SKP227-201ENST00000364445 330 ntBASIC5.09□□□□□ -1.59
HOXD8P13378 MIR548H3-201ENST00000408771 118 ntBASIC5.09□□□□□ -1.59
HOXD8P13378 RNU6-325P-201ENST00000411132 105 ntBASIC5.09□□□□□ -1.59
HOXD8P13378 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms