Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.45□□□□□ -2.18
FREM3P0C091 AC012640.5-201ENST00000623897 319 ntBASIC1.45□□□□□ -2.18
FREM3P0C091 AC079597.1-201ENST00000624306 508 ntBASIC1.45□□□□□ -2.18
FREM3P0C091 NUP58P1-201ENST00000502546 1738 ntBASIC1.45□□□□□ -2.18
FREM3P0C091 CR848007.1-201ENST00000442354 1699 ntBASIC1.44□□□□□ -2.18
FREM3P0C091 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.44□□□□□ -2.18
FREM3P0C091 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.44□□□□□ -2.18
FREM3P0C091 RNA5SP27-201ENST00000363839 119 ntBASIC1.44□□□□□ -2.18
FREM3P0C091 SNORA16.1-201ENST00000364597 132 ntBASIC1.44□□□□□ -2.18
FREM3P0C091 SNORA67.1-201ENST00000364749 141 ntBASIC1.44□□□□□ -2.18
FREM3P0C091 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.44□□□□□ -2.18
FREM3P0C091 AL358453.1-201ENST00000422522 250 ntBASIC1.44□□□□□ -2.18
FREM3P0C091 AC018630.2-202ENST00000422992 927 ntBASIC1.44□□□□□ -2.18
FREM3P0C091 AC012497.1-201ENST00000429392 575 ntBASIC1.44□□□□□ -2.18
FREM3P0C091 RNU7-95P-201ENST00000459222 64 ntBASIC1.44□□□□□ -2.18
FREM3P0C091 RPL7P18-201ENST00000478965 734 ntBASIC1.44□□□□□ -2.18
FREM3P0C091 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.44□□□□□ -2.18
FREM3P0C091 AC114786.4-201ENST00000508771 728 ntBASIC1.44□□□□□ -2.18
FREM3P0C091 AC114797.1-201ENST00000514003 728 ntBASIC1.44□□□□□ -2.18
FREM3P0C091 RNU6-1053P-201ENST00000515930 101 ntBASIC1.44□□□□□ -2.18
FREM3P0C091 Y_RNA.675-201ENST00000516389 149 ntBASIC1.44□□□□□ -2.18
FREM3P0C091 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.44□□□□□ -2.18
FREM3P0C091 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.44□□□□□ -2.18
FREM3P0C091 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.44□□□□□ -2.18
FREM3P0C091 AC007375.1-201ENST00000554513 578 ntBASIC1.44□□□□□ -2.18
FREM3P0C091 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.44□□□□□ -2.18
FREM3P0C091 HMGB1P14-201ENST00000557424 591 ntBASIC1.44□□□□□ -2.18
FREM3P0C091 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.44□□□□□ -2.18
FREM3P0C091 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.44□□□□□ -2.18
FREM3P0C091 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.44□□□□□ -2.18
FREM3P0C091 AC098679.5-201ENST00000624394 571 ntBASIC1.44□□□□□ -2.18
FREM3P0C091 MIR203B-201ENST00000636080 86 ntBASIC1.44□□□□□ -2.18
FREM3P0C091 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.44□□□□□ -2.18
FREM3P0C091 MTCO1P18-201ENST00000455518 1419 ntBASIC1.44□□□□□ -2.18
FREM3P0C091 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
FREM3P0C091 RNU6-252P-201ENST00000363232 107 ntBASIC1.43□□□□□ -2.18
FREM3P0C091 MIR17-201ENST00000385012 84 ntBASIC1.43□□□□□ -2.18
FREM3P0C091 RPS3AP24-201ENST00000407896 734 ntBASIC1.43□□□□□ -2.18
FREM3P0C091 RNU2-68P-201ENST00000410878 191 ntBASIC1.43□□□□□ -2.18
FREM3P0C091 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.43□□□□□ -2.18
FREM3P0C091 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.43□□□□□ -2.18
FREM3P0C091 BEND7P1-201ENST00000422058 457 ntBASIC1.43□□□□□ -2.18
FREM3P0C091 AL445687.1-201ENST00000439946 251 ntBASIC1.43□□□□□ -2.18
FREM3P0C091 OR10R1P-201ENST00000441524 1141 ntBASIC1.43□□□□□ -2.18
FREM3P0C091 AL136380.1-201ENST00000447970 162 ntBASIC1.43□□□□□ -2.18
FREM3P0C091 AC055855.1-201ENST00000489563 579 ntBASIC1.43□□□□□ -2.18
FREM3P0C091 RN7SL274P-201ENST00000492268 272 ntBASIC1.43□□□□□ -2.18
FREM3P0C091 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.43□□□□□ -2.18
FREM3P0C091 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.43□□□□□ -2.18
FREM3P0C091 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.43□□□□□ -2.18
FREM3P0C091 LSM6P2-201ENST00000552208 177 ntBASIC1.43□□□□□ -2.18
FREM3P0C091 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.43□□□□□ -2.18
FREM3P0C091 MIR7515-201ENST00000637837 67 ntBASIC1.43□□□□□ -2.18
FREM3P0C091 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.43□□□□□ -2.18
FREM3P0C091 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
FREM3P0C091 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
FREM3P0C091 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.43□□□□□ -2.18
FREM3P0C091 AL139276.1-201ENST00000311910 1001 ntBASIC1.43□□□□□ -2.18
FREM3P0C091 MIR489-201ENST00000384923 84 ntBASIC1.43□□□□□ -2.18
FREM3P0C091 SUMO2P12-201ENST00000405924 140 ntBASIC1.43□□□□□ -2.18
FREM3P0C091 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.43□□□□□ -2.18
FREM3P0C091 AL451074.3-201ENST00000437709 472 ntBASIC1.43□□□□□ -2.18
FREM3P0C091 BMI1P1-201ENST00000445879 941 ntBASIC1.43□□□□□ -2.18
FREM3P0C091 USP9YP10-201ENST00000454868 628 ntBASIC1.43□□□□□ -2.18
FREM3P0C091 AC140059.1-201ENST00000489238 361 ntBASIC1.43□□□□□ -2.18
FREM3P0C091 MTCO3P42-201ENST00000509488 518 ntBASIC1.43□□□□□ -2.18
FREM3P0C091 AC108078.2-201ENST00000510750 236 ntBASIC1.43□□□□□ -2.18
FREM3P0C091 MTCO3P39-201ENST00000514812 518 ntBASIC1.43□□□□□ -2.18
FREM3P0C091 SCARNA17.1-201ENST00000516211 143 ntBASIC1.43□□□□□ -2.18
FREM3P0C091 SCARNA17.2-201ENST00000516334 143 ntBASIC1.43□□□□□ -2.18
FREM3P0C091 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.43□□□□□ -2.18
FREM3P0C091 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.43□□□□□ -2.18
FREM3P0C091 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.43□□□□□ -2.18
FREM3P0C091 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.43□□□□□ -2.18
FREM3P0C091 BX322635.1-201ENST00000605804 496 ntBASIC1.43□□□□□ -2.18
FREM3P0C091 SCARNA17.4-201ENST00000614296 143 ntBASIC1.43□□□□□ -2.18
FREM3P0C091 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.42□□□□□ -2.18
FREM3P0C091 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
FREM3P0C091 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
FREM3P0C091 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
FREM3P0C091 SNORD48-201ENST00000364953 64 ntBASIC1.42□□□□□ -2.18
FREM3P0C091 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
FREM3P0C091 SNORA6-201ENST00000384033 151 ntBASIC1.42□□□□□ -2.18
FREM3P0C091 RNU6-441P-201ENST00000384545 106 ntBASIC1.42□□□□□ -2.18
FREM3P0C091 U3.40-201ENST00000408706 208 ntBASIC1.42□□□□□ -2.18
FREM3P0C091 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.42□□□□□ -2.18
FREM3P0C091 AC069528.1-202ENST00000482888 637 ntBASIC1.42□□□□□ -2.18
FREM3P0C091 AC005840.1-201ENST00000498412 377 ntBASIC1.42□□□□□ -2.18
FREM3P0C091 AC022634.1-201ENST00000520765 532 ntBASIC1.42□□□□□ -2.18
FREM3P0C091 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
FREM3P0C091 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.42□□□□□ -2.18
FREM3P0C091 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC1.42□□□□□ -2.18
FREM3P0C091 OR4K8P-201ENST00000578842 1048 ntBASIC1.42□□□□□ -2.18
FREM3P0C091 VN1R80P-201ENST00000597126 338 ntBASIC1.42□□□□□ -2.18
FREM3P0C091 GAS5-AS1-201ENST00000602767 694 ntBASIC1.42□□□□□ -2.18
FREM3P0C091 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC1.42□□□□□ -2.18
FREM3P0C091 AC027514.1-201ENST00000588561 1603 ntBASIC1.42□□□□□ -2.18
FREM3P0C091 RNU6-543P-201ENST00000362576 108 ntBASIC1.42□□□□□ -2.18
FREM3P0C091 SNORA7.1-201ENST00000363750 139 ntBASIC1.42□□□□□ -2.18
FREM3P0C091 RNA5SP125-201ENST00000364843 120 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms