Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
ZBED1O96006 HMGN2P8-201ENST00000391458 268 ntBASIC3.96□□□□□ -1.78
ZBED1O96006 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ZBED1O96006 AC068050.1-201ENST00000394891 380 ntBASIC3.96□□□□□ -1.78
ZBED1O96006 AC009237.5-201ENST00000414271 501 ntBASIC3.96□□□□□ -1.78
ZBED1O96006 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ZBED1O96006 UBE2D3P2-201ENST00000424409 445 ntBASIC3.96□□□□□ -1.78
ZBED1O96006 AC017083.1-201ENST00000428093 483 ntBASIC3.96□□□□□ -1.78
ZBED1O96006 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.96□□□□□ -1.78
ZBED1O96006 PIGFP3-201ENST00000441918 722 ntBASIC3.96□□□□□ -1.78
ZBED1O96006 NOTCH2P1-201ENST00000443481 624 ntBASIC3.96□□□□□ -1.78
ZBED1O96006 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.96□□□□□ -1.78
ZBED1O96006 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ZBED1O96006 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.96□□□□□ -1.78
ZBED1O96006 AL356010.1-201ENST00000456364 102 ntBASIC3.96□□□□□ -1.78
ZBED1O96006 RPS29P15-201ENST00000458329 171 ntBASIC3.96□□□□□ -1.78
ZBED1O96006 RN7SL542P-201ENST00000467147 294 ntBASIC3.96□□□□□ -1.78
ZBED1O96006 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.96□□□□□ -1.78
ZBED1O96006 RNA5SP208-201ENST00000516156 78 ntBASIC3.96□□□□□ -1.78
ZBED1O96006 RNU6-718P-201ENST00000516166 105 ntBASIC3.96□□□□□ -1.78
ZBED1O96006 RNU1-45P-201ENST00000517191 141 ntBASIC3.96□□□□□ -1.78
ZBED1O96006 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.96□□□□□ -1.78
ZBED1O96006 RANP3-201ENST00000530970 276 ntBASIC3.96□□□□□ -1.78
ZBED1O96006 OR5BN1P-201ENST00000532955 829 ntBASIC3.96□□□□□ -1.78
ZBED1O96006 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.96□□□□□ -1.78
ZBED1O96006 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.96□□□□□ -1.78
ZBED1O96006 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.96□□□□□ -1.78
ZBED1O96006 AC034105.4-201ENST00000568304 277 ntBASIC3.96□□□□□ -1.78
ZBED1O96006 MIR5187-201ENST00000583479 76 ntBASIC3.96□□□□□ -1.78
ZBED1O96006 BRDTP1-201ENST00000605735 677 ntBASIC3.96□□□□□ -1.78
ZBED1O96006 AP001596.2-201ENST00000608410 312 ntBASIC3.96□□□□□ -1.78
ZBED1O96006 AL359547.2-201ENST00000615810 418 ntBASIC3.96□□□□□ -1.78
ZBED1O96006 AC079684.1-201ENST00000621405 437 ntBASIC3.96□□□□□ -1.78
ZBED1O96006 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.96□□□□□ -1.78
ZBED1O96006 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.96□□□□□ -1.78
ZBED1O96006 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.96□□□□□ -1.78
ZBED1O96006 FAM35BP-202ENST00000497389 3337 ntBASIC3.96□□□□□ -1.78
ZBED1O96006 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ZBED1O96006 AC007785.2-201ENST00000598627 1916 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ZBED1O96006 AC006504.1-201ENST00000562493 3666 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
ZBED1O96006 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.95□□□□□ -1.78
ZBED1O96006 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.95□□□□□ -1.78
ZBED1O96006 UBE2L2-201ENST00000254302 429 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 RNU6-61P-201ENST00000365528 109 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 Y_RNA.402-201ENST00000383972 102 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 U8.11-201ENST00000384699 133 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 U8.12-201ENST00000384701 133 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 AL591416.1-201ENST00000404015 867 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 BTF3P7-201ENST00000407097 488 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 RNU6ATAC-201ENST00000408749 126 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ZBED1O96006 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.95□□□□□ -1.78
ZBED1O96006 Z85995.1-201ENST00000415547 335 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 ELOCP14-201ENST00000428070 331 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 AL606489.2-201ENST00000433886 234 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 AL591212.2-201ENST00000433923 257 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 ELOCP7-201ENST00000439968 331 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.95□□□□□ -1.78
ZBED1O96006 RNA5SP310-201ENST00000459084 116 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 U8.18-201ENST00000459285 133 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 RNU7-170P-201ENST00000459303 61 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 RPL7L1P8-201ENST00000469911 741 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 AC078785.3-201ENST00000476607 425 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 TRBV12-2-201ENST00000489763 344 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 Y_RNA.689-201ENST00000516589 107 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 RNU6-143P-201ENST00000516942 93 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 SUMO2P20-201ENST00000520803 283 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 OR5AQ1P-201ENST00000527596 927 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 AC104383.1-201ENST00000530297 370 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 AL157687.1-201ENST00000554853 619 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.95□□□□□ -1.78
ZBED1O96006 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.95□□□□□ -1.78
ZBED1O96006 AC024619.4-201ENST00000580924 316 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.95□□□□□ -1.78
ZBED1O96006 AC244205.2-202ENST00000635781 342 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 MTND5P42-201ENST00000637720 498 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 ZNF807-201ENST00000328088 1707 ntBASIC3.95□□□□□ -1.78
ZBED1O96006 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ZBED1O96006 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.94□□□□□ -1.78
ZBED1O96006 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
ZBED1O96006 OTUD4P1-201ENST00000237841 3067 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ZBED1O96006 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ZBED1O96006 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ZBED1O96006 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.94□□□□□ -1.78
ZBED1O96006 RNU1-18P-201ENST00000363062 164 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 RNU6-1167P-201ENST00000363227 94 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 Y_RNA.381-201ENST00000365666 102 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ZBED1O96006 RNU6-14P-201ENST00000384630 106 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 RNU6-780P-201ENST00000391030 104 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 SOD2P1-201ENST00000396543 562 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 CIR1P3-201ENST00000405137 479 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 AP000567.1-201ENST00000406413 156 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 RNU2-33P-201ENST00000410344 192 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 RPL30P2-201ENST00000414021 291 ntBASIC3.94□□□□□ -1.78
ZBED1O96006 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.94□□□□□ -1.78
ZBED1O96006 HMGB3P20-201ENST00000417997 600 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms