Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC007327.1-201ENST00000447461 264 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 MTND1P31-201ENST00000449206 961 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.26□□□□□ -2.05
SEMA3DO95025 LINC00888-204ENST00000487386 421 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 HMGB1P36-201ENST00000487709 576 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 AC090096.1-201ENST00000489168 390 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.26□□□□□ -2.05
SEMA3DO95025 AC234781.5-201ENST00000508429 271 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.26□□□□□ -2.05
SEMA3DO95025 AC026436.1-201ENST00000510537 270 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 AC112673.1-201ENST00000513168 575 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 RNU6-1256P-201ENST00000516539 103 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 RPL7P20-201ENST00000520308 745 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 AC021451.1-201ENST00000523498 1129 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 GLYCAM1-201ENST00000546596 285 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 AC234778.2-201ENST00000566241 354 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 AC105137.2-201ENST00000569073 466 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.26□□□□□ -2.05
SEMA3DO95025 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.26□□□□□ -2.05
SEMA3DO95025 AC079395.3-201ENST00000615161 484 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 HMGB1P24-202ENST00000615653 685 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 AL603758.1-201ENST00000618654 241 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 MIR6130-201ENST00000619419 109 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 AC116618.1-201ENST00000634617 774 ntBASIC2.26□□□□□ -2.05
SEMA3DO95025 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SEMA3DO95025 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SEMA3DO95025 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
SEMA3DO95025 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.25□□□□□ -2.05
SEMA3DO95025 ZNF720P1-201ENST00000562403 1939 ntBASIC2.25□□□□□ -2.05
SEMA3DO95025 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.25□□□□□ -2.05
SEMA3DO95025 U3.12-201ENST00000364498 214 ntBASIC2.25□□□□□ -2.05
SEMA3DO95025 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
SEMA3DO95025 RNU6-1207P-201ENST00000384343 107 ntBASIC2.25□□□□□ -2.05
SEMA3DO95025 MIR1290-201ENST00000408735 78 ntBASIC2.25□□□□□ -2.05
SEMA3DO95025 RPS3AP37-201ENST00000419176 745 ntBASIC2.25□□□□□ -2.05
SEMA3DO95025 NDUFB4P7-201ENST00000423198 363 ntBASIC2.25□□□□□ -2.05
SEMA3DO95025 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.25□□□□□ -2.05
SEMA3DO95025 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.25□□□□□ -2.05
SEMA3DO95025 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.25□□□□□ -2.05
SEMA3DO95025 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.25□□□□□ -2.05
SEMA3DO95025 RPS15AP27-201ENST00000449183 343 ntBASIC2.25□□□□□ -2.05
SEMA3DO95025 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.25□□□□□ -2.05
SEMA3DO95025 SNORD121B-201ENST00000458838 81 ntBASIC2.25□□□□□ -2.05
SEMA3DO95025 MTND1P16-201ENST00000465177 898 ntBASIC2.25□□□□□ -2.05
SEMA3DO95025 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.25□□□□□ -2.05
SEMA3DO95025 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.25□□□□□ -2.05
SEMA3DO95025 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.25□□□□□ -2.05
SEMA3DO95025 AC087241.2-201ENST00000535801 324 ntBASIC2.25□□□□□ -2.05
SEMA3DO95025 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.25□□□□□ -2.05
SEMA3DO95025 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.25□□□□□ -2.05
SEMA3DO95025 MTCYBP23-201ENST00000558717 1102 ntBASIC2.25□□□□□ -2.05
SEMA3DO95025 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.25□□□□□ -2.05
SEMA3DO95025 AC023813.2-201ENST00000564321 469 ntBASIC2.25□□□□□ -2.05
SEMA3DO95025 AC106782.4-201ENST00000568264 210 ntBASIC2.25□□□□□ -2.05
SEMA3DO95025 RPS3AP23-202ENST00000574601 686 ntBASIC2.25□□□□□ -2.05
SEMA3DO95025 OR4K7P-201ENST00000580232 945 ntBASIC2.25□□□□□ -2.05
SEMA3DO95025 MIR5007-201ENST00000583098 95 ntBASIC2.25□□□□□ -2.05
SEMA3DO95025 AC005498.1-201ENST00000592125 465 ntBASIC2.25□□□□□ -2.05
SEMA3DO95025 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.25□□□□□ -2.05
SEMA3DO95025 AC068313.1-201ENST00000604028 1008 ntBASIC2.25□□□□□ -2.05
SEMA3DO95025 AC006270.3-201ENST00000605967 1036 ntBASIC2.25□□□□□ -2.05
SEMA3DO95025 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SEMA3DO95025 AC107075.1-201ENST00000613695 314 ntBASIC2.25□□□□□ -2.05
SEMA3DO95025 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.25□□□□□ -2.05
SEMA3DO95025 OR5H6-203ENST00000642105 978 ntBASIC2.25□□□□□ -2.05
SEMA3DO95025 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
SEMA3DO95025 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.25□□□□□ -2.05
SEMA3DO95025 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.24□□□□□ -2.05
SEMA3DO95025 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
SEMA3DO95025 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
SEMA3DO95025 Y_RNA.111-201ENST00000363248 100 ntBASIC2.24□□□□□ -2.05
SEMA3DO95025 Y_RNA.192-201ENST00000363977 102 ntBASIC2.24□□□□□ -2.05
SEMA3DO95025 RNU6-289P-201ENST00000364093 107 ntBASIC2.24□□□□□ -2.05
SEMA3DO95025 AL122016.1-201ENST00000403365 367 ntBASIC2.24□□□□□ -2.05
SEMA3DO95025 AL136310.1-201ENST00000404926 654 ntBASIC2.24□□□□□ -2.05
SEMA3DO95025 MIR1284-201ENST00000408337 120 ntBASIC2.24□□□□□ -2.05
SEMA3DO95025 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.24□□□□□ -2.05
SEMA3DO95025 RN7SKP140-201ENST00000411196 284 ntBASIC2.24□□□□□ -2.05
SEMA3DO95025 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.24□□□□□ -2.05
SEMA3DO95025 WARS2P1-201ENST00000429678 537 ntBASIC2.24□□□□□ -2.05
SEMA3DO95025 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.24□□□□□ -2.05
SEMA3DO95025 EEF1A1P39-201ENST00000440791 250 ntBASIC2.24□□□□□ -2.05
SEMA3DO95025 OR10R1P-201ENST00000441524 1141 ntBASIC2.24□□□□□ -2.05
SEMA3DO95025 IFNA11P-201ENST00000446352 526 ntBASIC2.24□□□□□ -2.05
SEMA3DO95025 EXOSC3P1-201ENST00000448649 500 ntBASIC2.24□□□□□ -2.05
SEMA3DO95025 MTND2P24-201ENST00000453434 806 ntBASIC2.24□□□□□ -2.05
SEMA3DO95025 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.24□□□□□ -2.05
SEMA3DO95025 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.24□□□□□ -2.05
SEMA3DO95025 AC005410.1-202ENST00000460347 485 ntBASIC2.24□□□□□ -2.05
SEMA3DO95025 LARP1BP2-201ENST00000486594 519 ntBASIC2.24□□□□□ -2.05
SEMA3DO95025 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.24□□□□□ -2.05
SEMA3DO95025 AC021146.8-201ENST00000507455 733 ntBASIC2.24□□□□□ -2.05
SEMA3DO95025 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
SEMA3DO95025 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.24□□□□□ -2.05
SEMA3DO95025 AP003497.1-201ENST00000528472 562 ntBASIC2.24□□□□□ -2.05
SEMA3DO95025 AC021269.2-201ENST00000532318 330 ntBASIC2.24□□□□□ -2.05
SEMA3DO95025 AP000889.2-201ENST00000532684 490 ntBASIC2.24□□□□□ -2.05
SEMA3DO95025 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.24□□□□□ -2.05
SEMA3DO95025 AC078814.3-201ENST00000553036 491 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms