Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.35□□□□□ -1.87
LDB3O75112 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.35□□□□□ -1.87
LDB3O75112 COX6CP3-201ENST00000580869 223 ntBASIC3.35□□□□□ -1.87
LDB3O75112 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.35□□□□□ -1.87
LDB3O75112 MIR3158-1-201ENST00000583596 81 ntBASIC3.35□□□□□ -1.87
LDB3O75112 MIR4795-201ENST00000584182 89 ntBASIC3.35□□□□□ -1.87
LDB3O75112 AC007038.2-201ENST00000608095 740 ntBASIC3.35□□□□□ -1.87
LDB3O75112 AC004908.2-201ENST00000609090 574 ntBASIC3.35□□□□□ -1.87
LDB3O75112 AC009233.1-201ENST00000616477 371 ntBASIC3.35□□□□□ -1.87
LDB3O75112 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LDB3O75112 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LDB3O75112 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LDB3O75112 OTUD4P1-201ENST00000237841 3067 ntBASIC3.35□□□□□ -1.87
LDB3O75112 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
LDB3O75112 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LDB3O75112 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LDB3O75112 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.34□□□□□ -1.87
LDB3O75112 AL645937.1-201ENST00000641739 1652 ntBASIC3.34□□□□□ -1.87
LDB3O75112 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LDB3O75112 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LDB3O75112 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.34□□□□□ -1.87
LDB3O75112 MIR1-2-201ENST00000384961 85 ntBASIC3.34□□□□□ -1.87
LDB3O75112 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LDB3O75112 RNU6-1148P-201ENST00000410992 104 ntBASIC3.34□□□□□ -1.87
LDB3O75112 RNU2-71P-201ENST00000411395 189 ntBASIC3.34□□□□□ -1.87
LDB3O75112 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.34□□□□□ -1.87
LDB3O75112 AC006989.1-201ENST00000427212 131 ntBASIC3.34□□□□□ -1.87
LDB3O75112 AC091286.1-201ENST00000431233 461 ntBASIC3.34□□□□□ -1.87
LDB3O75112 OR4K11P-201ENST00000431829 904 ntBASIC3.34□□□□□ -1.87
LDB3O75112 AC119618.1-201ENST00000434191 222 ntBASIC3.34□□□□□ -1.87
LDB3O75112 TIMM9P1-201ENST00000436122 256 ntBASIC3.34□□□□□ -1.87
LDB3O75112 TAAR7P-201ENST00000436141 242 ntBASIC3.34□□□□□ -1.87
LDB3O75112 HSPD1P21-201ENST00000436541 245 ntBASIC3.34□□□□□ -1.87
LDB3O75112 RPL35AP22-201ENST00000436855 335 ntBASIC3.34□□□□□ -1.87
LDB3O75112 FTH1P1-201ENST00000437933 532 ntBASIC3.34□□□□□ -1.87
LDB3O75112 HMGB3P12-201ENST00000438745 556 ntBASIC3.34□□□□□ -1.87
LDB3O75112 AL136380.1-201ENST00000447970 162 ntBASIC3.34□□□□□ -1.87
LDB3O75112 AC108059.3-201ENST00000456388 214 ntBASIC3.34□□□□□ -1.87
LDB3O75112 RPL7P23-201ENST00000493874 747 ntBASIC3.34□□□□□ -1.87
LDB3O75112 AC093278.1-201ENST00000494700 600 ntBASIC3.34□□□□□ -1.87
LDB3O75112 AC020893.1-201ENST00000502452 580 ntBASIC3.34□□□□□ -1.87
LDB3O75112 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.34□□□□□ -1.87
LDB3O75112 RN7SKP13-201ENST00000515933 244 ntBASIC3.34□□□□□ -1.87
LDB3O75112 SNORA67.7-201ENST00000516664 135 ntBASIC3.34□□□□□ -1.87
LDB3O75112 AC026403.1-201ENST00000518938 295 ntBASIC3.34□□□□□ -1.87
LDB3O75112 AC090572.1-201ENST00000519251 160 ntBASIC3.34□□□□□ -1.87
LDB3O75112 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.34□□□□□ -1.87
LDB3O75112 HMGN1P28-201ENST00000521340 364 ntBASIC3.34□□□□□ -1.87
LDB3O75112 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.34□□□□□ -1.87
LDB3O75112 ARL2BPP2-201ENST00000550907 489 ntBASIC3.34□□□□□ -1.87
LDB3O75112 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.34□□□□□ -1.87
LDB3O75112 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.34□□□□□ -1.87
LDB3O75112 OR4K8P-201ENST00000578842 1048 ntBASIC3.34□□□□□ -1.87
LDB3O75112 MIR1254-2-201ENST00000579553 63 ntBASIC3.34□□□□□ -1.87
LDB3O75112 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.34□□□□□ -1.87
LDB3O75112 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.34□□□□□ -1.87
LDB3O75112 AC006116.10-201ENST00000591836 581 ntBASIC3.34□□□□□ -1.87
LDB3O75112 Z84480.1-201ENST00000605131 311 ntBASIC3.34□□□□□ -1.87
LDB3O75112 AC245389.1-201ENST00000605141 529 ntBASIC3.34□□□□□ -1.87
LDB3O75112 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.34□□□□□ -1.87
LDB3O75112 AC024940.5-201ENST00000622889 474 ntBASIC3.34□□□□□ -1.87
LDB3O75112 AC009093.8-201ENST00000641769 292 ntBASIC3.34□□□□□ -1.87
LDB3O75112 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.34□□□□□ -1.87
LDB3O75112 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LDB3O75112 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
LDB3O75112 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.34□□□□□ -1.88
LDB3O75112 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
LDB3O75112 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.33□□□□□ -1.88
LDB3O75112 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
LDB3O75112 FRG1CP-201ENST00000358464 769 ntBASIC3.33□□□□□ -1.88
LDB3O75112 Y_RNA.142-201ENST00000363491 102 ntBASIC3.33□□□□□ -1.88
LDB3O75112 RNU6-1155P-201ENST00000363554 107 ntBASIC3.33□□□□□ -1.88
LDB3O75112 RNU5A-8P-201ENST00000364102 114 ntBASIC3.33□□□□□ -1.88
LDB3O75112 RNU6-1322P-201ENST00000364309 107 ntBASIC3.33□□□□□ -1.88
LDB3O75112 SNORA69-201ENST00000383895 132 ntBASIC3.33□□□□□ -1.88
LDB3O75112 SNORA20.2-201ENST00000383922 131 ntBASIC3.33□□□□□ -1.88
LDB3O75112 RNU6-1074P-201ENST00000383995 104 ntBASIC3.33□□□□□ -1.88
LDB3O75112 MIR200C-201ENST00000384980 68 ntBASIC3.33□□□□□ -1.88
LDB3O75112 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
LDB3O75112 RNU6-278P-201ENST00000390945 109 ntBASIC3.33□□□□□ -1.88
LDB3O75112 RNU6-332P-201ENST00000391193 108 ntBASIC3.33□□□□□ -1.88
LDB3O75112 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LDB3O75112 AL591416.1-201ENST00000404015 867 ntBASIC3.33□□□□□ -1.88
LDB3O75112 U3.39-201ENST00000408569 239 ntBASIC3.33□□□□□ -1.88
LDB3O75112 RN7SKP285-201ENST00000410137 318 ntBASIC3.33□□□□□ -1.88
LDB3O75112 RNU2-62P-201ENST00000410868 191 ntBASIC3.33□□□□□ -1.88
LDB3O75112 RNU6-516P-201ENST00000411381 104 ntBASIC3.33□□□□□ -1.88
LDB3O75112 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.33□□□□□ -1.88
LDB3O75112 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LDB3O75112 AC093156.1-201ENST00000440382 670 ntBASIC3.33□□□□□ -1.88
LDB3O75112 USP9YP15-201ENST00000442391 422 ntBASIC3.33□□□□□ -1.88
LDB3O75112 AC093019.1-201ENST00000443135 252 ntBASIC3.33□□□□□ -1.88
LDB3O75112 RPS29P31-201ENST00000446147 164 ntBASIC3.33□□□□□ -1.88
LDB3O75112 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.33□□□□□ -1.88
LDB3O75112 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.33□□□□□ -1.88
LDB3O75112 CACYBPP2-201ENST00000453625 678 ntBASIC3.33□□□□□ -1.88
LDB3O75112 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.33□□□□□ -1.88
LDB3O75112 SNORD105B-201ENST00000458770 79 ntBASIC3.33□□□□□ -1.88
LDB3O75112 snoU13.4-201ENST00000458916 104 ntBASIC3.33□□□□□ -1.88
LDB3O75112 RNU7-59P-201ENST00000459101 61 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms