Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
GFRA3O60609 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA3O60609 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.38□□□□□ -1.55
GFRA3O60609 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA3O60609 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.38□□□□□ -1.55
GFRA3O60609 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA3O60609 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA3O60609 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
GFRA3O60609 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA3O60609 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA3O60609 Y_RNA.534-201ENST00000384599 112 ntBASIC5.38□□□□□ -1.55
GFRA3O60609 MIR329-1-201ENST00000385028 80 ntBASIC5.38□□□□□ -1.55
GFRA3O60609 CYCSP49-201ENST00000420810 319 ntBASIC5.38□□□□□ -1.55
GFRA3O60609 Z95327.1-201ENST00000446082 482 ntBASIC5.38□□□□□ -1.55
GFRA3O60609 AC010655.1-201ENST00000449336 292 ntBASIC5.38□□□□□ -1.55
GFRA3O60609 RPS23P2-201ENST00000463671 415 ntBASIC5.38□□□□□ -1.55
GFRA3O60609 AC108471.1-201ENST00000513977 287 ntBASIC5.38□□□□□ -1.55
GFRA3O60609 RNU6-781P-201ENST00000516377 101 ntBASIC5.38□□□□□ -1.55
GFRA3O60609 RNU6-412P-201ENST00000516434 106 ntBASIC5.38□□□□□ -1.55
GFRA3O60609 SCARNA16.4-201ENST00000516956 187 ntBASIC5.38□□□□□ -1.55
GFRA3O60609 AC034105.4-201ENST00000568304 277 ntBASIC5.38□□□□□ -1.55
GFRA3O60609 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.38□□□□□ -1.55
GFRA3O60609 NF1P5-201ENST00000588287 448 ntBASIC5.38□□□□□ -1.55
GFRA3O60609 DEFB117-201ENST00000602356 141 ntBASIC5.38□□□□□ -1.55
GFRA3O60609 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC5.38□□□□□ -1.55
GFRA3O60609 SCARNA4-201ENST00000629045 128 ntBASIC5.38□□□□□ -1.55
GFRA3O60609 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA3O60609 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
GFRA3O60609 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.38□□□□□ -1.55
GFRA3O60609 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA3O60609 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
GFRA3O60609 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA3O60609 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA3O60609 AC080128.1-201ENST00000474389 1917 ntBASIC5.38□□□□□ -1.55
GFRA3O60609 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA3O60609 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA3O60609 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.38□□□□□ -1.55
GFRA3O60609 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA3O60609 CENPCP1-201ENST00000533085 2578 ntBASIC5.38□□□□□ -1.55
GFRA3O60609 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
GFRA3O60609 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.38□□□□□ -1.55
GFRA3O60609 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA3O60609 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA3O60609 OR4F13P-202ENST00000560066 2054 ntBASIC5.38□□□□□ -1.55
GFRA3O60609 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA3O60609 AP004607.3-201ENST00000530354 3915 ntBASIC5.38□□□□□ -1.55
GFRA3O60609 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA3O60609 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA3O60609 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
GFRA3O60609 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.37□□□□□ -1.55
GFRA3O60609 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
GFRA3O60609 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GFRA3O60609 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.37□□□□□ -1.55
GFRA3O60609 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
GFRA3O60609 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.37□□□□□ -1.55
GFRA3O60609 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GFRA3O60609 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
GFRA3O60609 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GFRA3O60609 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
GFRA3O60609 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
GFRA3O60609 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GFRA3O60609 Y_RNA.163-201ENST00000363702 113 ntBASIC5.37□□□□□ -1.55
GFRA3O60609 RNU1-64P-201ENST00000365443 163 ntBASIC5.37□□□□□ -1.55
GFRA3O60609 RNU6-356P-201ENST00000384140 107 ntBASIC5.37□□□□□ -1.55
GFRA3O60609 SNORA37-201ENST00000384504 129 ntBASIC5.37□□□□□ -1.55
GFRA3O60609 Y_RNA.521-201ENST00000384560 114 ntBASIC5.37□□□□□ -1.55
GFRA3O60609 MIR616-201ENST00000385293 97 ntBASIC5.37□□□□□ -1.55
GFRA3O60609 AL592291.1-201ENST00000403830 352 ntBASIC5.37□□□□□ -1.55
GFRA3O60609 RNU4-43P-201ENST00000410628 137 ntBASIC5.37□□□□□ -1.55
GFRA3O60609 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.37□□□□□ -1.55
GFRA3O60609 AC127537.2-201ENST00000439258 465 ntBASIC5.37□□□□□ -1.55
GFRA3O60609 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.37□□□□□ -1.55
GFRA3O60609 RPL23AP75-201ENST00000491601 451 ntBASIC5.37□□□□□ -1.55
GFRA3O60609 AC022493.1-201ENST00000492984 337 ntBASIC5.37□□□□□ -1.55
GFRA3O60609 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.37□□□□□ -1.55
GFRA3O60609 RNU6-561P-201ENST00000516222 102 ntBASIC5.37□□□□□ -1.55
GFRA3O60609 RNU6-1007P-201ENST00000516586 107 ntBASIC5.37□□□□□ -1.55
GFRA3O60609 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC5.37□□□□□ -1.55
GFRA3O60609 MIR4429-201ENST00000580105 73 ntBASIC5.37□□□□□ -1.55
GFRA3O60609 AL391358.1-201ENST00000605342 190 ntBASIC5.37□□□□□ -1.55
GFRA3O60609 RMST_6.1-201ENST00000611980 203 ntBASIC5.37□□□□□ -1.55
GFRA3O60609 AL352984.2-202ENST00000613699 155 ntBASIC5.37□□□□□ -1.55
GFRA3O60609 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
GFRA3O60609 DOCK11P1-201ENST00000553480 5932 ntBASIC5.37□□□□□ -1.55
GFRA3O60609 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.37□□□□□ -1.55
GFRA3O60609 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC5.37□□□□□ -1.55
GFRA3O60609 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.37□□□□□ -1.55
GFRA3O60609 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.37□□□□□ -1.55
GFRA3O60609 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
GFRA3O60609 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
GFRA3O60609 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
GFRA3O60609 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GFRA3O60609 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
GFRA3O60609 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.36□□□□□ -1.55
GFRA3O60609 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
GFRA3O60609 AC009951.1-201ENST00000623674 2614 ntBASIC5.36□□□□□ -1.55
GFRA3O60609 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.36□□□□□ -1.55
GFRA3O60609 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.36□□□□□ -1.55
GFRA3O60609 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
GFRA3O60609 AL022323.4-201ENST00000623980 13120 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms