Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 MTCO2P6-201ENST00000463134 685 ntBASIC2.73□□□□□ -1.97
LCMT2O60294 BZW1P2-201ENST00000473537 826 ntBASIC2.73□□□□□ -1.97
LCMT2O60294 AC005178.1-201ENST00000508392 440 ntBASIC2.73□□□□□ -1.97
LCMT2O60294 SCARNA15.2-201ENST00000516409 127 ntBASIC2.73□□□□□ -1.97
LCMT2O60294 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.73□□□□□ -1.97
LCMT2O60294 AC107016.2-201ENST00000547968 190 ntBASIC2.73□□□□□ -1.97
LCMT2O60294 AC007954.1-201ENST00000554198 494 ntBASIC2.73□□□□□ -1.97
LCMT2O60294 HMGB1P6-201ENST00000569046 646 ntBASIC2.73□□□□□ -1.97
LCMT2O60294 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.73□□□□□ -1.97
LCMT2O60294 RPL23AP78-201ENST00000599928 470 ntBASIC2.73□□□□□ -1.97
LCMT2O60294 AC010620.2-201ENST00000600135 313 ntBASIC2.73□□□□□ -1.97
LCMT2O60294 AP000403.1-201ENST00000603349 851 ntBASIC2.73□□□□□ -1.97
LCMT2O60294 MTCYBP22-201ENST00000603788 447 ntBASIC2.73□□□□□ -1.97
LCMT2O60294 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.73□□□□□ -1.97
LCMT2O60294 AC091965.4-201ENST00000607691 587 ntBASIC2.73□□□□□ -1.97
LCMT2O60294 AC090115.4-201ENST00000609970 188 ntBASIC2.73□□□□□ -1.97
LCMT2O60294 AL359198.2-201ENST00000611836 194 ntBASIC2.73□□□□□ -1.97
LCMT2O60294 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.73□□□□□ -1.97
LCMT2O60294 AC097520.1-201ENST00000624435 385 ntBASIC2.73□□□□□ -1.97
LCMT2O60294 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.73□□□□□ -1.97
LCMT2O60294 AC092593.1-201ENST00000515413 1815 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 AC009487.2-201ENST00000420969 6821 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LCMT2O60294 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LCMT2O60294 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.72□□□□□ -1.97
LCMT2O60294 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LCMT2O60294 RNU6-553P-201ENST00000364047 96 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.72□□□□□ -1.97
LCMT2O60294 Y_RNA.560-201ENST00000384689 102 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 MIR512-1-201ENST00000384913 84 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 U8.14-201ENST00000390843 143 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 RNA5SP354-201ENST00000391247 136 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 AF228730.1-201ENST00000397972 663 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LCMT2O60294 RNU6-516P-201ENST00000411381 104 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 Z92545.1-201ENST00000411782 234 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 AL445567.1-201ENST00000439121 144 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.72□□□□□ -1.97
LCMT2O60294 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.72□□□□□ -1.97
LCMT2O60294 NIPA2P5-201ENST00000452282 464 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.72□□□□□ -1.97
LCMT2O60294 ZNF114P1-201ENST00000453500 292 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 MTCO1P42-201ENST00000457379 726 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.72□□□□□ -1.97
LCMT2O60294 AC233702.1-201ENST00000482905 502 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 RPS27P26-201ENST00000494583 239 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 AC135721.1-201ENST00000497954 479 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.72□□□□□ -1.97
LCMT2O60294 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
LCMT2O60294 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.72□□□□□ -1.97
LCMT2O60294 SCARNA13-201ENST00000516672 275 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 RNU6-1282P-201ENST00000516735 96 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.72□□□□□ -1.97
LCMT2O60294 AC068135.2-201ENST00000569293 1028 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 MTCO3P13-201ENST00000577757 781 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.72□□□□□ -1.97
LCMT2O60294 WISP1-OT1-201ENST00000602893 642 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 AC131902.3-201ENST00000611767 581 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 AC135507.2-201ENST00000612443 309 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 AC004696.1-201ENST00000614345 607 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 AC112204.3-201ENST00000623822 332 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 AL159972.1-201ENST00000625150 448 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 AL137790.1-201ENST00000634283 177 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 MIR6733-201ENST00000635723 61 ntBASIC2.72□□□□□ -1.97
LCMT2O60294 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
LCMT2O60294 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LCMT2O60294 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.71□□□□□ -1.97
LCMT2O60294 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
LCMT2O60294 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LCMT2O60294 RNU1-39P-201ENST00000383897 165 ntBASIC2.71□□□□□ -1.98
LCMT2O60294 MIR181A2-201ENST00000384863 110 ntBASIC2.71□□□□□ -1.98
LCMT2O60294 AC078974.1-201ENST00000411597 223 ntBASIC2.71□□□□□ -1.98
LCMT2O60294 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.71□□□□□ -1.98
LCMT2O60294 AL592148.1-201ENST00000413568 445 ntBASIC2.71□□□□□ -1.98
LCMT2O60294 Z85995.1-201ENST00000415547 335 ntBASIC2.71□□□□□ -1.98
LCMT2O60294 AL451074.5-201ENST00000415894 435 ntBASIC2.71□□□□□ -1.98
LCMT2O60294 AL513477.1-202ENST00000417061 214 ntBASIC2.71□□□□□ -1.98
LCMT2O60294 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.71□□□□□ -1.98
LCMT2O60294 MTND4P20-201ENST00000424125 869 ntBASIC2.71□□□□□ -1.98
LCMT2O60294 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.71□□□□□ -1.98
LCMT2O60294 AL135938.1-201ENST00000443141 297 ntBASIC2.71□□□□□ -1.98
LCMT2O60294 DDX3P2-201ENST00000446138 111 ntBASIC2.71□□□□□ -1.98
LCMT2O60294 EPS15P1-201ENST00000448836 336 ntBASIC2.71□□□□□ -1.98
LCMT2O60294 MTND1P9-201ENST00000453775 944 ntBASIC2.71□□□□□ -1.98
LCMT2O60294 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.71□□□□□ -1.98
LCMT2O60294 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.71□□□□□ -1.98
LCMT2O60294 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.71□□□□□ -1.98
LCMT2O60294 HIGD1AP13-201ENST00000509878 289 ntBASIC2.71□□□□□ -1.98
LCMT2O60294 MTCO1P47-201ENST00000523889 1271 ntBASIC2.71□□□□□ -1.98
LCMT2O60294 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.71□□□□□ -1.98
LCMT2O60294 AP002748.2-201ENST00000528671 348 ntBASIC2.71□□□□□ -1.98
LCMT2O60294 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.71□□□□□ -1.98
LCMT2O60294 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.71□□□□□ -1.98
LCMT2O60294 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.71□□□□□ -1.98
LCMT2O60294 AC109446.2-201ENST00000567872 497 ntBASIC2.71□□□□□ -1.98
LCMT2O60294 AC005951.2-201ENST00000576282 495 ntBASIC2.71□□□□□ -1.98
LCMT2O60294 AC004852.3-201ENST00000614131 326 ntBASIC2.71□□□□□ -1.98
LCMT2O60294 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.71□□□□□ -1.98
LCMT2O60294 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.71□□□□□ -1.98
LCMT2O60294 AC019226.1-201ENST00000625666 515 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms