Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXA2O43364 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC5.74□□□□□ -1.49
HOXA2O43364 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXA2O43364 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXA2O43364 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXA2O43364 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXA2O43364 AC027288.2-201ENST00000553028 243 ntBASIC5.74□□□□□ -1.49
HOXA2O43364 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXA2O43364 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXA2O43364 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.74□□□□□ -1.49
HOXA2O43364 AL645944.1-201ENST00000603857 493 ntBASIC5.74□□□□□ -1.49
HOXA2O43364 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
HOXA2O43364 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.74□□□□□ -1.49
HOXA2O43364 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
HOXA2O43364 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HOXA2O43364 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.74□□□□□ -1.49
HOXA2O43364 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HOXA2O43364 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HOXA2O43364 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
HOXA2O43364 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.74□□□□□ -1.49
HOXA2O43364 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HOXA2O43364 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HOXA2O43364 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
HOXA2O43364 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.74□□□□□ -1.49
HOXA2O43364 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXA2O43364 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HOXA2O43364 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXA2O43364 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXA2O43364 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.73□□□□□ -1.49
HOXA2O43364 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXA2O43364 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.73□□□□□ -1.49
HOXA2O43364 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.73□□□□□ -1.49
HOXA2O43364 Y_RNA.8-201ENST00000362353 102 ntBASIC5.73□□□□□ -1.49
HOXA2O43364 RNU6-428P-201ENST00000362942 107 ntBASIC5.73□□□□□ -1.49
HOXA2O43364 RNU4-9P-201ENST00000364951 139 ntBASIC5.73□□□□□ -1.49
HOXA2O43364 RNU6-514P-201ENST00000384208 107 ntBASIC5.73□□□□□ -1.49
HOXA2O43364 MIR34A-201ENST00000385130 110 ntBASIC5.73□□□□□ -1.49
HOXA2O43364 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HOXA2O43364 LAP3P1-201ENST00000403648 294 ntBASIC5.73□□□□□ -1.49
HOXA2O43364 DDX39BP1-205ENST00000422507 192 ntBASIC5.73□□□□□ -1.49
HOXA2O43364 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC5.73□□□□□ -1.49
HOXA2O43364 AL359073.1-201ENST00000448036 403 ntBASIC5.73□□□□□ -1.49
HOXA2O43364 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.73□□□□□ -1.49
HOXA2O43364 AC097484.1-201ENST00000471148 389 ntBASIC5.73□□□□□ -1.49
HOXA2O43364 AL049874.1-201ENST00000489560 388 ntBASIC5.73□□□□□ -1.49
HOXA2O43364 MTND5P41-201ENST00000517498 206 ntBASIC5.73□□□□□ -1.49
HOXA2O43364 AC021006.3-201ENST00000530771 192 ntBASIC5.73□□□□□ -1.49
HOXA2O43364 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.73□□□□□ -1.49
HOXA2O43364 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.73□□□□□ -1.49
HOXA2O43364 AC100827.5-201ENST00000615883 426 ntBASIC5.73□□□□□ -1.49
HOXA2O43364 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.73□□□□□ -1.49
HOXA2O43364 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HOXA2O43364 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HOXA2O43364 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
HOXA2O43364 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.73□□□□□ -1.49
HOXA2O43364 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HOXA2O43364 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HOXA2O43364 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXA2O43364 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HOXA2O43364 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXA2O43364 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXA2O43364 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXA2O43364 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXA2O43364 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXA2O43364 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HOXA2O43364 SNURFL-201ENST00000309296 343 ntBASIC5.72□□□□□ -1.49
HOXA2O43364 SNORA25.1-201ENST00000362326 128 ntBASIC5.72□□□□□ -1.49
HOXA2O43364 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.72□□□□□ -1.49
HOXA2O43364 RFX3-203ENST00000381984 364 ntTSL 3 BASIC5.72□□□□□ -1.49
HOXA2O43364 RNU6-1074P-201ENST00000383995 104 ntBASIC5.72□□□□□ -1.49
HOXA2O43364 SNORA51.8-201ENST00000384234 132 ntBASIC5.72□□□□□ -1.49
HOXA2O43364 AL078599.1-201ENST00000402075 293 ntBASIC5.72□□□□□ -1.49
HOXA2O43364 RNU2-51P-201ENST00000410708 197 ntBASIC5.72□□□□□ -1.49
HOXA2O43364 Z82188.1-201ENST00000436709 154 ntBASIC5.72□□□□□ -1.49
HOXA2O43364 snoU13.30-201ENST00000458951 104 ntBASIC5.72□□□□□ -1.49
HOXA2O43364 AC087477.1-201ENST00000465747 340 ntBASIC5.72□□□□□ -1.49
HOXA2O43364 RPL23AP65-201ENST00000475608 468 ntBASIC5.72□□□□□ -1.49
HOXA2O43364 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.72□□□□□ -1.49
HOXA2O43364 RNU6-377P-201ENST00000515965 102 ntBASIC5.72□□□□□ -1.49
HOXA2O43364 RN7SKP260-201ENST00000516907 149 ntBASIC5.72□□□□□ -1.49
HOXA2O43364 RN7SKP272-201ENST00000516988 232 ntBASIC5.72□□□□□ -1.49
HOXA2O43364 RAB9BP1-201ENST00000519581 626 ntBASIC5.72□□□□□ -1.49
HOXA2O43364 NDUFB4P11-201ENST00000560510 395 ntBASIC5.72□□□□□ -1.49
HOXA2O43364 MIR3934-201ENST00000579806 107 ntBASIC5.72□□□□□ -1.49
HOXA2O43364 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.72□□□□□ -1.49
HOXA2O43364 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.72□□□□□ -1.49
HOXA2O43364 AC060766.3-201ENST00000591442 263 ntBASIC5.72□□□□□ -1.49
HOXA2O43364 AP000769.2-201ENST00000602344 396 ntBASIC5.72□□□□□ -1.49
HOXA2O43364 MIR6820-201ENST00000611508 62 ntBASIC5.72□□□□□ -1.49
HOXA2O43364 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.72□□□□□ -1.49
HOXA2O43364 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HOXA2O43364 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.72□□□□□ -1.49
HOXA2O43364 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.72□□□□□ -1.49
HOXA2O43364 AC026951.1-201ENST00000559530 2459 ntBASIC5.72□□□□□ -1.49
HOXA2O43364 AC114774.1-201ENST00000507410 1770 ntBASIC5.72□□□□□ -1.49
HOXA2O43364 SCARNA15-201ENST00000607520 4325 ntBASIC5.72□□□□□ -1.49
HOXA2O43364 AC083843.3-201ENST00000623679 2186 ntBASIC5.72□□□□□ -1.49
HOXA2O43364 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
HOXA2O43364 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.71□□□□□ -1.49
HOXA2O43364 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms