Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 UBE2V1P13-201ENST00000436983 439 ntBASIC2.73□□□□□ -1.97
CDX4O14627 LARP1BP3-201ENST00000437229 869 ntBASIC2.73□□□□□ -1.97
CDX4O14627 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.73□□□□□ -1.97
CDX4O14627 TRIM60P18-201ENST00000441518 828 ntBASIC2.73□□□□□ -1.97
CDX4O14627 AC021382.1-201ENST00000483523 359 ntBASIC2.73□□□□□ -1.97
CDX4O14627 AC109486.1-201ENST00000486833 374 ntBASIC2.73□□□□□ -1.97
CDX4O14627 MTCO3P7-201ENST00000510008 774 ntBASIC2.73□□□□□ -1.97
CDX4O14627 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.73□□□□□ -1.97
CDX4O14627 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.73□□□□□ -1.97
CDX4O14627 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.73□□□□□ -1.97
CDX4O14627 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.73□□□□□ -1.97
CDX4O14627 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.73□□□□□ -1.97
CDX4O14627 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.73□□□□□ -1.97
CDX4O14627 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CDX4O14627 SNRPGP16-201ENST00000533275 226 ntBASIC2.73□□□□□ -1.97
CDX4O14627 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.73□□□□□ -1.97
CDX4O14627 AC006362.1-201ENST00000567392 174 ntBASIC2.73□□□□□ -1.97
CDX4O14627 AC012414.6-201ENST00000568241 401 ntBASIC2.73□□□□□ -1.97
CDX4O14627 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.73□□□□□ -1.97
CDX4O14627 AC012213.3-201ENST00000577199 777 ntBASIC2.73□□□□□ -1.97
CDX4O14627 AC025165.5-201ENST00000602802 578 ntBASIC2.73□□□□□ -1.97
CDX4O14627 AC106028.5-201ENST00000610332 395 ntBASIC2.73□□□□□ -1.97
CDX4O14627 AL592295.2-201ENST00000612578 206 ntBASIC2.73□□□□□ -1.97
CDX4O14627 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CDX4O14627 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.73□□□□□ -1.97
CDX4O14627 AC095031.1-201ENST00000623685 672 ntBASIC2.73□□□□□ -1.97
CDX4O14627 AC079597.1-201ENST00000624306 508 ntBASIC2.73□□□□□ -1.97
CDX4O14627 AL136164.4-201ENST00000625013 2135 ntBASIC2.73□□□□□ -1.97
CDX4O14627 AC090582.1-201ENST00000636321 199 ntBASIC2.73□□□□□ -1.97
CDX4O14627 MIR4275-201ENST00000636486 87 ntBASIC2.73□□□□□ -1.97
CDX4O14627 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CDX4O14627 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.73□□□□□ -1.97
CDX4O14627 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.73□□□□□ -1.97
CDX4O14627 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.73□□□□□ -1.97
CDX4O14627 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CDX4O14627 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CDX4O14627 AP003122.5-201ENST00000527668 3766 ntBASIC2.72□□□□□ -1.97
CDX4O14627 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CDX4O14627 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CDX4O14627 RNU4-21P-201ENST00000362802 126 ntBASIC2.72□□□□□ -1.97
CDX4O14627 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.72□□□□□ -1.97
CDX4O14627 RNU6-882P-201ENST00000391025 103 ntBASIC2.72□□□□□ -1.97
CDX4O14627 U3.42-201ENST00000408746 214 ntBASIC2.72□□□□□ -1.97
CDX4O14627 RNU4-65P-201ENST00000410473 140 ntBASIC2.72□□□□□ -1.97
CDX4O14627 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.72□□□□□ -1.97
CDX4O14627 HMGB1P11-201ENST00000413899 637 ntBASIC2.72□□□□□ -1.97
CDX4O14627 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.72□□□□□ -1.97
CDX4O14627 AC009963.1-201ENST00000417265 157 ntBASIC2.72□□□□□ -1.97
CDX4O14627 Z99497.1-201ENST00000421282 135 ntBASIC2.72□□□□□ -1.97
CDX4O14627 AC006366.1-201ENST00000422002 759 ntBASIC2.72□□□□□ -1.97
CDX4O14627 MTCO1P39-201ENST00000426148 480 ntBASIC2.72□□□□□ -1.97
CDX4O14627 AC079780.1-201ENST00000428259 207 ntBASIC2.72□□□□□ -1.97
CDX4O14627 MED14P1-201ENST00000430517 648 ntBASIC2.72□□□□□ -1.97
CDX4O14627 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.72□□□□□ -1.97
CDX4O14627 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.72□□□□□ -1.97
CDX4O14627 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.72□□□□□ -1.97
CDX4O14627 MTCO1P19-201ENST00000443487 500 ntBASIC2.72□□□□□ -1.97
CDX4O14627 RPL17P49-201ENST00000443728 411 ntBASIC2.72□□□□□ -1.97
CDX4O14627 EPS15P1-201ENST00000448836 336 ntBASIC2.72□□□□□ -1.97
CDX4O14627 AC104308.1-201ENST00000454621 333 ntBASIC2.72□□□□□ -1.97
CDX4O14627 HMGN1P18-201ENST00000457642 277 ntBASIC2.72□□□□□ -1.97
CDX4O14627 SNORD121B-201ENST00000458838 81 ntBASIC2.72□□□□□ -1.97
CDX4O14627 RPS23P3-201ENST00000470993 430 ntBASIC2.72□□□□□ -1.97
CDX4O14627 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.72□□□□□ -1.97
CDX4O14627 MTND4P2-201ENST00000507767 1203 ntBASIC2.72□□□□□ -1.97
CDX4O14627 AC105914.1-201ENST00000511798 226 ntBASIC2.72□□□□□ -1.97
CDX4O14627 MTND3P5-201ENST00000512798 333 ntBASIC2.72□□□□□ -1.97
CDX4O14627 AC022483.1-201ENST00000514020 567 ntBASIC2.72□□□□□ -1.97
CDX4O14627 RNU1-143P-201ENST00000516296 146 ntBASIC2.72□□□□□ -1.97
CDX4O14627 RNU6-528P-201ENST00000516926 100 ntBASIC2.72□□□□□ -1.97
CDX4O14627 HMGN1P28-201ENST00000521340 364 ntBASIC2.72□□□□□ -1.97
CDX4O14627 AP003122.3-201ENST00000526316 255 ntBASIC2.72□□□□□ -1.97
CDX4O14627 AP003033.1-201ENST00000527244 415 ntBASIC2.72□□□□□ -1.97
CDX4O14627 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.72□□□□□ -1.97
CDX4O14627 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CDX4O14627 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.72□□□□□ -1.97
CDX4O14627 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.72□□□□□ -1.97
CDX4O14627 AC068790.2-201ENST00000602601 557 ntBASIC2.72□□□□□ -1.97
CDX4O14627 AC112187.2-201ENST00000604345 283 ntBASIC2.72□□□□□ -1.97
CDX4O14627 AL022099.1-201ENST00000604551 712 ntBASIC2.72□□□□□ -1.97
CDX4O14627 AC012443.1-201ENST00000605605 231 ntBASIC2.72□□□□□ -1.97
CDX4O14627 AC239868.4-201ENST00000608318 671 ntBASIC2.72□□□□□ -1.97
CDX4O14627 U1.23-201ENST00000610293 146 ntBASIC2.72□□□□□ -1.97
CDX4O14627 RNU1-68P-201ENST00000615382 146 ntBASIC2.72□□□□□ -1.97
CDX4O14627 ZNF658B-202ENST00000615961 3375 ntBASIC2.72□□□□□ -1.97
CDX4O14627 MIR6130-201ENST00000619419 109 ntBASIC2.72□□□□□ -1.97
CDX4O14627 U1.39-201ENST00000621562 146 ntBASIC2.72□□□□□ -1.97
CDX4O14627 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.72□□□□□ -1.97
CDX4O14627 AL353748.2-201ENST00000622148 471 ntBASIC2.72□□□□□ -1.97
CDX4O14627 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.72□□□□□ -1.97
CDX4O14627 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CDX4O14627 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.72□□□□□ -1.97
CDX4O14627 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CDX4O14627 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CDX4O14627 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CDX4O14627 TAB3P1-202ENST00000452645 1634 ntBASIC2.71□□□□□ -1.97
CDX4O14627 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
CDX4O14627 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.71□□□□□ -1.98
CDX4O14627 Y_RNA.553-201ENST00000384670 102 ntBASIC2.71□□□□□ -1.98
CDX4O14627 RN7SKP285-201ENST00000410137 318 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 152 ms