Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 ZNF861P-201ENST00000588126 639 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 AC005261.5-201ENST00000596280 355 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 BNIP3P23-201ENST00000599655 511 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 VN1R85P-201ENST00000601587 426 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 BCRP9-201ENST00000605312 388 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 AC107294.1-201ENST00000609524 467 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 MIR3670-4-201ENST00000612260 65 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 MIR7157-201ENST00000635801 60 ntBASIC2.03□□□□□ -2.08
SMKR1H3BMG3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.03□□□□□ -2.08
SMKR1H3BMG3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SMKR1H3BMG3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.03□□□□□ -2.08
SMKR1H3BMG3 ADAM3A-203ENST00000461344 2157 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 AC093536.2-201ENST00000565257 1406 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SMKR1H3BMG3 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 RPL21P132-201ENST00000331267 462 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 SNORA38-201ENST00000363946 132 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 RNU6-512P-201ENST00000364438 103 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.02□□□□□ -2.09
SMKR1H3BMG3 DEFA7P-201ENST00000382676 285 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 SNORA54-201ENST00000384281 123 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 MIR592-201ENST00000384959 97 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SMKR1H3BMG3 MIR937-201ENST00000401271 86 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SMKR1H3BMG3 RN7SKP263-201ENST00000411194 309 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.02□□□□□ -2.09
SMKR1H3BMG3 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.02□□□□□ -2.09
SMKR1H3BMG3 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.02□□□□□ -2.09
SMKR1H3BMG3 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.02□□□□□ -2.09
SMKR1H3BMG3 AL353729.1-201ENST00000425044 720 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 MTCO2P23-201ENST00000425216 680 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.02□□□□□ -2.09
SMKR1H3BMG3 AC104651.1-201ENST00000427559 735 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 AL035407.1-201ENST00000429211 571 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.02□□□□□ -2.09
SMKR1H3BMG3 HMGB1P27-201ENST00000431429 603 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.02□□□□□ -2.09
SMKR1H3BMG3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.02□□□□□ -2.09
SMKR1H3BMG3 ST13P20-201ENST00000447996 1065 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 AC108059.3-201ENST00000456388 214 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 MTND2P39-201ENST00000457230 764 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.02□□□□□ -2.09
SMKR1H3BMG3 AP000852.1-201ENST00000472460 573 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.02□□□□□ -2.09
SMKR1H3BMG3 RPL23AP41-201ENST00000484754 458 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 GZMAP1-201ENST00000503054 631 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.02□□□□□ -2.09
SMKR1H3BMG3 RNU6-703P-201ENST00000516946 107 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 SCARNA3-201ENST00000517097 143 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 RNU1-45P-201ENST00000517191 141 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 OR4R1P-201ENST00000529879 463 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 AC010186.2-204ENST00000537668 439 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SMKR1H3BMG3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
SMKR1H3BMG3 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.02□□□□□ -2.09
SMKR1H3BMG3 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.02□□□□□ -2.09
SMKR1H3BMG3 MIR3199-1-201ENST00000582434 88 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.02□□□□□ -2.09
SMKR1H3BMG3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.02□□□□□ -2.09
SMKR1H3BMG3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.02□□□□□ -2.09
SMKR1H3BMG3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
SMKR1H3BMG3 CR381653.2-201ENST00000624041 768 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 AC091965.5-201ENST00000624785 342 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 AC068724.3-201ENST00000625906 87 ntBASIC2.02□□□□□ -2.09
SMKR1H3BMG3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SMKR1H3BMG3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.01□□□□□ -2.09
SMKR1H3BMG3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.01□□□□□ -2.09
SMKR1H3BMG3 RNU5A-8P-201ENST00000364102 114 ntBASIC2.01□□□□□ -2.09
SMKR1H3BMG3 SNORA25.6-201ENST00000364121 118 ntBASIC2.01□□□□□ -2.09
SMKR1H3BMG3 SNORA67.1-201ENST00000364749 141 ntBASIC2.01□□□□□ -2.09
SMKR1H3BMG3 RNA5SP88-201ENST00000365560 109 ntBASIC2.01□□□□□ -2.09
SMKR1H3BMG3 RNU1-52P-201ENST00000384190 164 ntBASIC2.01□□□□□ -2.09
SMKR1H3BMG3 RNA5SP210-201ENST00000391034 120 ntBASIC2.01□□□□□ -2.09
SMKR1H3BMG3 ANAPC10P1-201ENST00000395991 556 ntBASIC2.01□□□□□ -2.09
SMKR1H3BMG3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.01□□□□□ -2.09
SMKR1H3BMG3 VPS26BP1-201ENST00000417155 755 ntBASIC2.01□□□□□ -2.09
SMKR1H3BMG3 MTCO2P21-201ENST00000419780 677 ntBASIC2.01□□□□□ -2.09
SMKR1H3BMG3 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.01□□□□□ -2.09
SMKR1H3BMG3 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.01□□□□□ -2.09
SMKR1H3BMG3 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.01□□□□□ -2.09
SMKR1H3BMG3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.01□□□□□ -2.09
SMKR1H3BMG3 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.01□□□□□ -2.09
SMKR1H3BMG3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.01□□□□□ -2.09
SMKR1H3BMG3 LARP1BP3-201ENST00000437229 869 ntBASIC2.01□□□□□ -2.09
SMKR1H3BMG3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.01□□□□□ -2.09
SMKR1H3BMG3 AL671855.1-201ENST00000446875 1203 ntBASIC2.01□□□□□ -2.09
SMKR1H3BMG3 AL009048.1-201ENST00000450437 298 ntBASIC2.01□□□□□ -2.09
SMKR1H3BMG3 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.01□□□□□ -2.09
SMKR1H3BMG3 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.01□□□□□ -2.09
SMKR1H3BMG3 RPL37P25-201ENST00000507308 276 ntBASIC2.01□□□□□ -2.09
SMKR1H3BMG3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.01□□□□□ -2.09
SMKR1H3BMG3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.01□□□□□ -2.09
SMKR1H3BMG3 MTND2P7-201ENST00000521337 640 ntBASIC2.01□□□□□ -2.09
SMKR1H3BMG3 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.01□□□□□ -2.09
SMKR1H3BMG3 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC2.01□□□□□ -2.09
SMKR1H3BMG3 AC013828.2-201ENST00000532487 235 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms