Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 Y_RNA.86-201ENST00000363020 111 ntBASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 RNU6-38P-201ENST00000384085 107 ntBASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 MIR514A2-201ENST00000385131 88 ntBASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 MIR514A3-201ENST00000385132 88 ntBASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 SNORA48.7-201ENST00000391302 135 ntBASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 RNA5SP39-201ENST00000411245 120 ntBASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 RPS20P14-201ENST00000412545 360 ntBASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 AL157831.1-201ENST00000426134 473 ntBASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 TAAR7P-201ENST00000436141 242 ntBASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 RNU6-333P-201ENST00000459117 107 ntBASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 AC104136.1-201ENST00000512969 394 ntBASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 AC046134.1-201ENST00000514454 666 ntBASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 AC135001.1-201ENST00000544546 283 ntBASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 AC004024.1-201ENST00000549244 247 ntBASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 AC078814.3-201ENST00000553036 491 ntBASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 HSPE1P5-201ENST00000561489 272 ntBASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 RN7SL600P-201ENST00000581811 299 ntBASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 UBE2V2P2-201ENST00000587677 504 ntBASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 MIR432-201ENST00000606207 94 ntBASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 RNU6-89P-201ENST00000606519 100 ntBASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 AL021997.2-201ENST00000615674 271 ntBASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 AC090132.2-201ENST00000615881 347 ntBASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA6Q9Y5G7 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 CBX3P1-201ENST00000325243 554 ntBASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 RNU1-14P-201ENST00000362759 152 ntBASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 RNA5SP175-201ENST00000364275 119 ntBASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 Y_RNA.279-201ENST00000364763 95 ntBASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 RNU6-332P-201ENST00000391193 108 ntBASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 RPL32P23-201ENST00000397237 405 ntBASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 AL590704.1-201ENST00000402856 794 ntBASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 RNU6-628P-201ENST00000410675 107 ntBASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 EEF1A1P40-201ENST00000412883 573 ntBASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 AL356095.1-201ENST00000417217 199 ntBASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 BX842559.1-201ENST00000419615 532 ntBASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 ABCF2P2-201ENST00000450549 296 ntBASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 AP000852.1-201ENST00000472460 573 ntBASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 SLC25A15P5-201ENST00000508033 253 ntBASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 RNA5SP73-201ENST00000516744 108 ntBASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 RN7SKP289-201ENST00000517244 295 ntBASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 TVP23BP1-201ENST00000557500 617 ntBASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 AC053481.4-201ENST00000583164 216 ntBASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 AL035413.2-201ENST00000604801 525 ntBASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 AC009570.1-201ENST00000609599 745 ntBASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 AC093913.1-201ENST00000614178 329 ntBASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 RMST_9.1-201ENST00000619945 193 ntBASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 AC099654.5-201ENST00000636479 350 ntBASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHGA6Q9Y5G7 MTND4P12-201ENST00000498999 1377 ntBASIC4.05□□□□□ -1.76
PCDHGA6Q9Y5G7 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA6Q9Y5G7 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA6Q9Y5G7 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA6Q9Y5G7 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA6Q9Y5G7 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.05□□□□□ -1.76
PCDHGA6Q9Y5G7 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
PCDHGA6Q9Y5G7 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHGA6Q9Y5G7 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA6Q9Y5G7 RNU6-1197P-201ENST00000391183 107 ntBASIC4.05□□□□□ -1.76
PCDHGA6Q9Y5G7 RNU6-510P-201ENST00000391239 108 ntBASIC4.05□□□□□ -1.76
PCDHGA6Q9Y5G7 CISD1P1-201ENST00000393907 327 ntBASIC4.05□□□□□ -1.76
PCDHGA6Q9Y5G7 RNU2-33P-201ENST00000410344 192 ntBASIC4.05□□□□□ -1.76
PCDHGA6Q9Y5G7 Z85995.1-201ENST00000415547 335 ntBASIC4.05□□□□□ -1.76
PCDHGA6Q9Y5G7 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDHGA6Q9Y5G7 RPL7P10-201ENST00000417407 739 ntBASIC4.05□□□□□ -1.76
PCDHGA6Q9Y5G7 BTF3L4P3-201ENST00000418879 476 ntBASIC4.05□□□□□ -1.76
PCDHGA6Q9Y5G7 AL160275.3-201ENST00000423876 471 ntBASIC4.05□□□□□ -1.76
PCDHGA6Q9Y5G7 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDHGA6Q9Y5G7 AL451050.1-201ENST00000450126 415 ntBASIC4.05□□□□□ -1.76
PCDHGA6Q9Y5G7 AC007547.1-201ENST00000462177 490 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 201.7 ms