Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.45□□□□□ -1.54
NOD1Q9Y239 AL157871.3-201ENST00000557231 293 ntBASIC5.45□□□□□ -1.54
NOD1Q9Y239 NDUFB4P11-201ENST00000560510 395 ntBASIC5.45□□□□□ -1.54
NOD1Q9Y239 SNORD84-203ENST00000584275 78 ntBASIC5.45□□□□□ -1.54
NOD1Q9Y239 RPS29P30-201ENST00000600975 111 ntBASIC5.45□□□□□ -1.54
NOD1Q9Y239 AL390123.1-201ENST00000603216 237 ntBASIC5.45□□□□□ -1.54
NOD1Q9Y239 AC010632.3-201ENST00000611377 369 ntBASIC5.45□□□□□ -1.54
NOD1Q9Y239 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.45□□□□□ -1.54
NOD1Q9Y239 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.45□□□□□ -1.54
NOD1Q9Y239 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NOD1Q9Y239 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
NOD1Q9Y239 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.45□□□□□ -1.54
NOD1Q9Y239 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NOD1Q9Y239 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NOD1Q9Y239 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
NOD1Q9Y239 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.45□□□□□ -1.54
NOD1Q9Y239 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NOD1Q9Y239 AL391684.1-202ENST00000641293 1636 ntBASIC5.45□□□□□ -1.54
NOD1Q9Y239 MTND5P6-201ENST00000422338 1798 ntBASIC5.44□□□□□ -1.54
NOD1Q9Y239 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.44□□□□□ -1.54
NOD1Q9Y239 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NOD1Q9Y239 AC126755.2-208ENST00000327792 462 ntBASIC5.44□□□□□ -1.54
NOD1Q9Y239 RPL9P7-201ENST00000330965 580 ntBASIC5.44□□□□□ -1.54
NOD1Q9Y239 AC138969.1-213ENST00000331436 462 ntBASIC5.44□□□□□ -1.54
NOD1Q9Y239 AL590240.1-201ENST00000334118 313 ntBASIC5.44□□□□□ -1.54
NOD1Q9Y239 Y_RNA.562-201ENST00000384695 113 ntBASIC5.44□□□□□ -1.54
NOD1Q9Y239 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
NOD1Q9Y239 U3.42-201ENST00000408746 214 ntBASIC5.44□□□□□ -1.54
NOD1Q9Y239 EIF4A1P3-201ENST00000411521 244 ntBASIC5.44□□□□□ -1.54
NOD1Q9Y239 AC114755.2-201ENST00000413520 361 ntBASIC5.44□□□□□ -1.54
NOD1Q9Y239 MTCO3P19-201ENST00000415864 321 ntBASIC5.44□□□□□ -1.54
NOD1Q9Y239 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NOD1Q9Y239 AC092423.1-201ENST00000430165 186 ntBASIC5.44□□□□□ -1.54
NOD1Q9Y239 AL513043.1-201ENST00000439124 535 ntBASIC5.44□□□□□ -1.54
NOD1Q9Y239 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.44□□□□□ -1.54
NOD1Q9Y239 TDGF1P1-201ENST00000445734 527 ntBASIC5.44□□□□□ -1.54
NOD1Q9Y239 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.44□□□□□ -1.54
NOD1Q9Y239 MTND4LP30-201ENST00000454092 297 ntBASIC5.44□□□□□ -1.54
NOD1Q9Y239 RPL23AP56-201ENST00000460778 453 ntBASIC5.44□□□□□ -1.54
NOD1Q9Y239 RPL9P9-202ENST00000466501 579 ntBASIC5.44□□□□□ -1.54
NOD1Q9Y239 AC110792.1-201ENST00000491826 472 ntBASIC5.44□□□□□ -1.54
NOD1Q9Y239 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.44□□□□□ -1.54
NOD1Q9Y239 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NOD1Q9Y239 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.44□□□□□ -1.54
NOD1Q9Y239 RNU6-570P-201ENST00000517051 105 ntBASIC5.44□□□□□ -1.54
NOD1Q9Y239 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.44□□□□□ -1.54
NOD1Q9Y239 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.44□□□□□ -1.54
NOD1Q9Y239 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.44□□□□□ -1.54
NOD1Q9Y239 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.44□□□□□ -1.54
NOD1Q9Y239 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.44□□□□□ -1.54
NOD1Q9Y239 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.44□□□□□ -1.54
NOD1Q9Y239 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.44□□□□□ -1.54
NOD1Q9Y239 FAM27B-201ENST00000610601 213 ntBASIC5.44□□□□□ -1.54
NOD1Q9Y239 AC130454.1-201ENST00000622948 401 ntBASIC5.44□□□□□ -1.54
NOD1Q9Y239 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
NOD1Q9Y239 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
NOD1Q9Y239 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NOD1Q9Y239 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.44□□□□□ -1.54
NOD1Q9Y239 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
NOD1Q9Y239 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.43□□□□□ -1.54
NOD1Q9Y239 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NOD1Q9Y239 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NOD1Q9Y239 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NOD1Q9Y239 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NOD1Q9Y239 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
NOD1Q9Y239 AL049555.1-201ENST00000562834 1933 ntBASIC5.43□□□□□ -1.54
NOD1Q9Y239 RN7SKP224-201ENST00000364140 325 ntBASIC5.43□□□□□ -1.54
NOD1Q9Y239 SNORA70.2-201ENST00000364506 135 ntBASIC5.43□□□□□ -1.54
NOD1Q9Y239 RNU6-395P-201ENST00000365662 106 ntBASIC5.43□□□□□ -1.54
NOD1Q9Y239 MIR628-201ENST00000385229 95 ntBASIC5.43□□□□□ -1.54
NOD1Q9Y239 SNORA48.4-201ENST00000391089 134 ntBASIC5.43□□□□□ -1.54
NOD1Q9Y239 EI24P1-201ENST00000416584 867 ntBASIC5.43□□□□□ -1.54
NOD1Q9Y239 AL096701.2-201ENST00000416920 238 ntBASIC5.43□□□□□ -1.54
NOD1Q9Y239 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.43□□□□□ -1.54
NOD1Q9Y239 AC092573.2-201ENST00000434546 243 ntBASIC5.43□□□□□ -1.54
NOD1Q9Y239 AC016831.4-201ENST00000438302 307 ntBASIC5.43□□□□□ -1.54
NOD1Q9Y239 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.43□□□□□ -1.54
NOD1Q9Y239 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.43□□□□□ -1.54
NOD1Q9Y239 FTH1P9-201ENST00000513251 355 ntBASIC5.43□□□□□ -1.54
NOD1Q9Y239 IGKV2D-23-201ENST00000518179 286 ntBASIC5.43□□□□□ -1.54
NOD1Q9Y239 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.43□□□□□ -1.54
NOD1Q9Y239 FKBP1BP1-201ENST00000553366 325 ntBASIC5.43□□□□□ -1.54
NOD1Q9Y239 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.43□□□□□ -1.54
NOD1Q9Y239 AC022968.1-201ENST00000567372 442 ntBASIC5.43□□□□□ -1.54
NOD1Q9Y239 AC002545.1-201ENST00000592511 181 ntBASIC5.43□□□□□ -1.54
NOD1Q9Y239 AC098826.3-201ENST00000603823 466 ntBASIC5.43□□□□□ -1.54
NOD1Q9Y239 AL355810.1-201ENST00000614629 552 ntBASIC5.43□□□□□ -1.54
NOD1Q9Y239 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.43□□□□□ -1.54
NOD1Q9Y239 CR381572.2-201ENST00000624852 397 ntBASIC5.43□□□□□ -1.54
NOD1Q9Y239 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NOD1Q9Y239 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NOD1Q9Y239 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
NOD1Q9Y239 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
NOD1Q9Y239 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.43□□□□□ -1.54
NOD1Q9Y239 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NOD1Q9Y239 AL592437.2-201ENST00000421655 2434 ntBASIC5.43□□□□□ -1.54
NOD1Q9Y239 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NOD1Q9Y239 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
NOD1Q9Y239 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
NOD1Q9Y239 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms