Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 RPL7L1P10-201ENST00000427790 463 ntBASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 AL512286.1-201ENST00000439244 400 ntBASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 AC006539.3-201ENST00000454258 129 ntBASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 AL139824.2-201ENST00000458731 1095 ntBASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 RNA5SP310-201ENST00000459084 116 ntBASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 AP003122.3-201ENST00000526316 255 ntBASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 SNORD53-201ENST00000579969 78 ntBASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 MIR4307-201ENST00000582802 84 ntBASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 AL109653.1-201ENST00000603091 248 ntBASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 AL353778.1-201ENST00000603149 408 ntBASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 AL360219.1-201ENST00000610230 366 ntBASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 AC079248.2-201ENST00000623779 326 ntBASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 SDAD1P2-201ENST00000441308 2028 ntBASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 MIR591-201ENST00000385290 95 ntBASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 RNU6ATAC3P-201ENST00000387974 126 ntBASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 AL138827.1-201ENST00000402666 306 ntBASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 AC107081.1-201ENST00000414975 361 ntBASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 RPS27AP14-201ENST00000422868 454 ntBASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 RPS29P21-201ENST00000496272 170 ntBASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 AC009101.1-201ENST00000568135 242 ntBASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 AC068790.3-201ENST00000602988 553 ntBASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 AC110741.2-201ENST00000605278 268 ntBASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 AC008962.1-201ENST00000605729 304 ntBASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 CTSLP2-204ENST00000629029 392 ntBASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
SHROOM4Q9ULL8 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SHROOM4Q9ULL8 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SHROOM4Q9ULL8 U8.2-201ENST00000363156 134 ntBASIC5.31□□□□□ -1.56
SHROOM4Q9ULL8 Y_RNA.560-201ENST00000384689 102 ntBASIC5.31□□□□□ -1.56
SHROOM4Q9ULL8 AC109780.2-201ENST00000413467 845 ntBASIC5.31□□□□□ -1.56
SHROOM4Q9ULL8 AL365203.2-201ENST00000423444 196 ntBASIC5.31□□□□□ -1.56
SHROOM4Q9ULL8 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.31□□□□□ -1.56
SHROOM4Q9ULL8 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC5.31□□□□□ -1.56
SHROOM4Q9ULL8 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.31□□□□□ -1.56
SHROOM4Q9ULL8 BZW1P2-201ENST00000473537 826 ntBASIC5.31□□□□□ -1.56
SHROOM4Q9ULL8 RPF2P2-201ENST00000504693 896 ntBASIC5.31□□□□□ -1.56
SHROOM4Q9ULL8 AC008413.1-201ENST00000511864 177 ntBASIC5.31□□□□□ -1.56
SHROOM4Q9ULL8 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.31□□□□□ -1.56
SHROOM4Q9ULL8 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.31□□□□□ -1.56
SHROOM4Q9ULL8 OR4H12P-201ENST00000556269 907 ntBASIC5.31□□□□□ -1.56
SHROOM4Q9ULL8 AC011260.1-201ENST00000578420 472 ntBASIC5.31□□□□□ -1.56
SHROOM4Q9ULL8 BCRP9-201ENST00000605312 388 ntBASIC5.31□□□□□ -1.56
SHROOM4Q9ULL8 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC5.31□□□□□ -1.56
SHROOM4Q9ULL8 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SHROOM4Q9ULL8 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SHROOM4Q9ULL8 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SHROOM4Q9ULL8 RNA5SP68-201ENST00000363885 119 ntBASIC5.3□□□□□ -1.56
SHROOM4Q9ULL8 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHROOM4Q9ULL8 SNORA1.3-201ENST00000384676 136 ntBASIC5.3□□□□□ -1.56
SHROOM4Q9ULL8 RNU6-1197P-201ENST00000391183 107 ntBASIC5.3□□□□□ -1.56
SHROOM4Q9ULL8 AL138878.1-201ENST00000405131 347 ntBASIC5.3□□□□□ -1.56
SHROOM4Q9ULL8 AC245291.1-201ENST00000419501 328 ntBASIC5.3□□□□□ -1.56
SHROOM4Q9ULL8 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC5.3□□□□□ -1.56
SHROOM4Q9ULL8 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.3□□□□□ -1.56
SHROOM4Q9ULL8 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC5.3□□□□□ -1.56
SHROOM4Q9ULL8 IFNA11P-201ENST00000446352 526 ntBASIC5.3□□□□□ -1.56
SHROOM4Q9ULL8 RPS20P20-201ENST00000460498 340 ntBASIC5.3□□□□□ -1.56
SHROOM4Q9ULL8 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.3□□□□□ -1.56
SHROOM4Q9ULL8 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.3□□□□□ -1.56
SHROOM4Q9ULL8 AC116347.2-201ENST00000514912 523 ntBASIC5.3□□□□□ -1.56
SHROOM4Q9ULL8 RNU6-798P-201ENST00000516912 103 ntBASIC5.3□□□□□ -1.56
SHROOM4Q9ULL8 RNU6-232P-201ENST00000517144 64 ntBASIC5.3□□□□□ -1.56
SHROOM4Q9ULL8 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.3□□□□□ -1.56
SHROOM4Q9ULL8 DUXAP5-201ENST00000529668 529 ntBASIC5.3□□□□□ -1.56
SHROOM4Q9ULL8 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.3□□□□□ -1.56
SHROOM4Q9ULL8 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.3□□□□□ -1.56
SHROOM4Q9ULL8 AC091965.4-201ENST00000607691 587 ntBASIC5.3□□□□□ -1.56
SHROOM4Q9ULL8 AC004908.2-201ENST00000609090 574 ntBASIC5.3□□□□□ -1.56
SHROOM4Q9ULL8 AL603758.1-201ENST00000618654 241 ntBASIC5.3□□□□□ -1.56
SHROOM4Q9ULL8 AL603755.1-201ENST00000619504 163 ntBASIC5.3□□□□□ -1.56
SHROOM4Q9ULL8 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC5.3□□□□□ -1.56
SHROOM4Q9ULL8 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHROOM4Q9ULL8 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHROOM4Q9ULL8 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHROOM4Q9ULL8 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHROOM4Q9ULL8 RNU6-501P-201ENST00000364072 100 ntBASIC5.29□□□□□ -1.56
SHROOM4Q9ULL8 SNORA36C-201ENST00000384289 132 ntBASIC5.29□□□□□ -1.56
SHROOM4Q9ULL8 AL356057.3-201ENST00000402607 340 ntBASIC5.29□□□□□ -1.56
SHROOM4Q9ULL8 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC5.29□□□□□ -1.56
SHROOM4Q9ULL8 RNU7-59P-201ENST00000459101 61 ntBASIC5.29□□□□□ -1.56
SHROOM4Q9ULL8 AC068587.2-201ENST00000478386 781 ntBASIC5.29□□□□□ -1.56
SHROOM4Q9ULL8 RPL23AP41-201ENST00000484754 458 ntBASIC5.29□□□□□ -1.56
SHROOM4Q9ULL8 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC5.29□□□□□ -1.56
SHROOM4Q9ULL8 AP000907.2-201ENST00000530827 353 ntBASIC5.29□□□□□ -1.56
SHROOM4Q9ULL8 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.29□□□□□ -1.56
SHROOM4Q9ULL8 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.29□□□□□ -1.56
SHROOM4Q9ULL8 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.29□□□□□ -1.56
SHROOM4Q9ULL8 OR10AB1P-201ENST00000609613 938 ntBASIC5.29□□□□□ -1.56
SHROOM4Q9ULL8 AC006111.3-201ENST00000622137 383 ntBASIC5.29□□□□□ -1.56
SHROOM4Q9ULL8 AC112204.3-201ENST00000623822 332 ntBASIC5.29□□□□□ -1.56
SHROOM4Q9ULL8 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
SHROOM4Q9ULL8 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SHROOM4Q9ULL8 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms