Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 AL360270.2-201ENST00000562952 5985 ntBASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 RNU6-212P-201ENST00000362642 104 ntBASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 U3.13-201ENST00000364804 214 ntBASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 RNU1-43P-201ENST00000365052 165 ntBASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 RNA5SP494-201ENST00000410653 129 ntBASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 GPS2P1-201ENST00000411761 986 ntBASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 HIGD1AP2-201ENST00000446367 280 ntBASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 AC079354.2-201ENST00000453523 154 ntBASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 MTND4LP30-201ENST00000454092 297 ntBASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 AC074250.1-201ENST00000511117 192 ntBASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 RN7SKP66-201ENST00000516681 231 ntBASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 Y_RNA.713-201ENST00000517013 96 ntBASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 SNORA31.19-201ENST00000517079 126 ntBASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 AC024940.3-201ENST00000538551 316 ntBASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 AC005476.1-201ENST00000554427 397 ntBASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 AC011447.4-201ENST00000587562 111 ntBASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 AC005046.1-201ENST00000608515 625 ntBASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 AL731566.2-201ENST00000618971 317 ntBASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 ABCC13-202ENST00000463099 3842 ntBASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 Z75746.1-201ENST00000440243 2080 ntBASIC4.76□□□□□ -1.65
FOXD3Q9UJU5 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
FOXD3Q9UJU5 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.75□□□□□ -1.65
FOXD3Q9UJU5 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.75□□□□□ -1.65
FOXD3Q9UJU5 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
FOXD3Q9UJU5 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
FOXD3Q9UJU5 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
FOXD3Q9UJU5 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
FOXD3Q9UJU5 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
FOXD3Q9UJU5 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.75□□□□□ -1.65
FOXD3Q9UJU5 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.75□□□□□ -1.65
FOXD3Q9UJU5 RNU6-166P-201ENST00000384371 107 ntBASIC4.75□□□□□ -1.65
FOXD3Q9UJU5 MIR548H3-201ENST00000408771 118 ntBASIC4.75□□□□□ -1.65
FOXD3Q9UJU5 AL078601.1-201ENST00000444542 271 ntBASIC4.75□□□□□ -1.65
FOXD3Q9UJU5 AL590664.1-201ENST00000448065 339 ntBASIC4.75□□□□□ -1.65
FOXD3Q9UJU5 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.75□□□□□ -1.65
FOXD3Q9UJU5 RPL23AP24-201ENST00000458203 385 ntBASIC4.75□□□□□ -1.65
FOXD3Q9UJU5 snoU13.4-201ENST00000458916 104 ntBASIC4.75□□□□□ -1.65
FOXD3Q9UJU5 OR51K1P-201ENST00000510214 950 ntBASIC4.75□□□□□ -1.65
FOXD3Q9UJU5 RN7SKP40-201ENST00000517211 242 ntBASIC4.75□□□□□ -1.65
FOXD3Q9UJU5 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
FOXD3Q9UJU5 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.75□□□□□ -1.65
FOXD3Q9UJU5 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.75□□□□□ -1.65
FOXD3Q9UJU5 AC027309.3-201ENST00000623419 351 ntBASIC4.75□□□□□ -1.65
FOXD3Q9UJU5 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
FOXD3Q9UJU5 AP000560.1-201ENST00000624150 1937 ntBASIC4.75□□□□□ -1.65
FOXD3Q9UJU5 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
FOXD3Q9UJU5 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 RNU6-227P-201ENST00000362865 103 ntBASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 RPL37P18-201ENST00000411602 243 ntBASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 AC093162.1-201ENST00000419682 124 ntBASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 AC007919.1-201ENST00000429380 217 ntBASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 RPL7AP49-201ENST00000429522 581 ntBASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 MTND3P9-201ENST00000429526 346 ntBASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 AL591438.1-201ENST00000433508 581 ntBASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 SUMO1P3-201ENST00000439961 304 ntBASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 SUMO1P2-201ENST00000452524 304 ntBASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 ANP32BP2-201ENST00000454525 545 ntBASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 RNU6-570P-201ENST00000517051 105 ntBASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 MIR2355-201ENST00000517199 87 ntBASIC4.74□□□□□ -1.65
FOXD3Q9UJU5 AC092490.3-201ENST00000545370 572 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms