Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.19□□□□□ -2.06
RIMBP3Q9UFD9 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.19□□□□□ -2.06
RIMBP3Q9UFD9 AP001029.3-201ENST00000588063 596 ntBASIC2.19□□□□□ -2.06
RIMBP3Q9UFD9 AC020923.1-201ENST00000624021 917 ntBASIC2.19□□□□□ -2.06
RIMBP3Q9UFD9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
RIMBP3Q9UFD9 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC2.18□□□□□ -2.06
RIMBP3Q9UFD9 AC016769.3-201ENST00000396562 315 ntBASIC2.18□□□□□ -2.06
RIMBP3Q9UFD9 AL591034.1-201ENST00000407447 340 ntBASIC2.18□□□□□ -2.06
RIMBP3Q9UFD9 RNA5SP489-201ENST00000410986 109 ntBASIC2.18□□□□□ -2.06
RIMBP3Q9UFD9 HMGN1P14-201ENST00000412459 517 ntBASIC2.18□□□□□ -2.06
RIMBP3Q9UFD9 AC109780.2-201ENST00000413467 845 ntBASIC2.18□□□□□ -2.06
RIMBP3Q9UFD9 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.18□□□□□ -2.06
RIMBP3Q9UFD9 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.18□□□□□ -2.06
RIMBP3Q9UFD9 AC092989.1-201ENST00000481235 277 ntBASIC2.18□□□□□ -2.06
RIMBP3Q9UFD9 AC023424.2-201ENST00000493479 777 ntBASIC2.18□□□□□ -2.06
RIMBP3Q9UFD9 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.18□□□□□ -2.06
RIMBP3Q9UFD9 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RIMBP3Q9UFD9 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.18□□□□□ -2.06
RIMBP3Q9UFD9 AC105313.1-201ENST00000509121 353 ntBASIC2.18□□□□□ -2.06
RIMBP3Q9UFD9 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.18□□□□□ -2.06
RIMBP3Q9UFD9 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.18□□□□□ -2.06
RIMBP3Q9UFD9 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.18□□□□□ -2.06
RIMBP3Q9UFD9 MIR3935-201ENST00000583472 104 ntBASIC2.18□□□□□ -2.06
RIMBP3Q9UFD9 AC009220.3-201ENST00000604318 586 ntBASIC2.18□□□□□ -2.06
RIMBP3Q9UFD9 BNIP3P7-201ENST00000605641 516 ntBASIC2.18□□□□□ -2.06
RIMBP3Q9UFD9 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.18□□□□□ -2.06
RIMBP3Q9UFD9 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RIMBP3Q9UFD9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
RIMBP3Q9UFD9 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
RIMBP3Q9UFD9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
RIMBP3Q9UFD9 SNORA18.2-201ENST00000383865 132 ntBASIC2.17□□□□□ -2.06
RIMBP3Q9UFD9 RNU6-98P-201ENST00000384173 107 ntBASIC2.17□□□□□ -2.06
RIMBP3Q9UFD9 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.17□□□□□ -2.06
RIMBP3Q9UFD9 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.17□□□□□ -2.06
RIMBP3Q9UFD9 AC090515.1-201ENST00000465295 476 ntBASIC2.17□□□□□ -2.06
RIMBP3Q9UFD9 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.17□□□□□ -2.06
RIMBP3Q9UFD9 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.17□□□□□ -2.06
RIMBP3Q9UFD9 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.17□□□□□ -2.06
RIMBP3Q9UFD9 NOP56P3-201ENST00000549457 385 ntBASIC2.17□□□□□ -2.06
RIMBP3Q9UFD9 SETP2-201ENST00000553886 926 ntBASIC2.17□□□□□ -2.06
RIMBP3Q9UFD9 AC107954.1-201ENST00000565906 727 ntBASIC2.17□□□□□ -2.06
RIMBP3Q9UFD9 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
RIMBP3Q9UFD9 AC068831.7-201ENST00000616954 363 ntBASIC2.17□□□□□ -2.06
RIMBP3Q9UFD9 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.17□□□□□ -2.06
RIMBP3Q9UFD9 RNU6-891P-201ENST00000384280 111 ntBASIC2.17□□□□□ -2.06
RIMBP3Q9UFD9 SNORA40.6-201ENST00000391153 128 ntBASIC2.17□□□□□ -2.06
RIMBP3Q9UFD9 AIMP1P2-201ENST00000425294 312 ntBASIC2.17□□□□□ -2.06
RIMBP3Q9UFD9 AC007560.1-201ENST00000426912 237 ntBASIC2.17□□□□□ -2.06
RIMBP3Q9UFD9 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.17□□□□□ -2.06
RIMBP3Q9UFD9 SNRPEP4-201ENST00000435815 279 ntBASIC2.17□□□□□ -2.06
RIMBP3Q9UFD9 RPL21P131-201ENST00000497298 483 ntBASIC2.17□□□□□ -2.06
RIMBP3Q9UFD9 RNA5SP121-201ENST00000516537 101 ntBASIC2.17□□□□□ -2.06
RIMBP3Q9UFD9 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.17□□□□□ -2.06
RIMBP3Q9UFD9 SNORD84-203ENST00000584275 78 ntBASIC2.17□□□□□ -2.06
RIMBP3Q9UFD9 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.17□□□□□ -2.06
RIMBP3Q9UFD9 AP003122.6-201ENST00000623831 495 ntBASIC2.17□□□□□ -2.06
RIMBP3Q9UFD9 AC006963.1-201ENST00000624003 1052 ntBASIC2.17□□□□□ -2.06
RIMBP3Q9UFD9 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RIMBP3Q9UFD9 Y_RNA.258-201ENST00000364613 105 ntBASIC2.16□□□□□ -2.06
RIMBP3Q9UFD9 RNU1-109P-201ENST00000383960 147 ntBASIC2.16□□□□□ -2.06
RIMBP3Q9UFD9 Z96811.1-201ENST00000445880 108 ntBASIC2.16□□□□□ -2.06
RIMBP3Q9UFD9 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.16□□□□□ -2.06
RIMBP3Q9UFD9 AC087879.1-201ENST00000474343 374 ntBASIC2.16□□□□□ -2.06
RIMBP3Q9UFD9 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.16□□□□□ -2.06
RIMBP3Q9UFD9 AC112191.3-201ENST00000604371 277 ntBASIC2.16□□□□□ -2.06
RIMBP3Q9UFD9 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
RIMBP3Q9UFD9 RNU6-492P-201ENST00000363035 104 ntBASIC2.15□□□□□ -2.07
RIMBP3Q9UFD9 MIR421-201ENST00000365696 85 ntBASIC2.15□□□□□ -2.07
RIMBP3Q9UFD9 PRRC2CP1-201ENST00000404428 159 ntBASIC2.15□□□□□ -2.07
RIMBP3Q9UFD9 RNU6-1077P-201ENST00000410506 102 ntBASIC2.15□□□□□ -2.07
RIMBP3Q9UFD9 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.15□□□□□ -2.07
RIMBP3Q9UFD9 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.15□□□□□ -2.07
RIMBP3Q9UFD9 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.15□□□□□ -2.07
RIMBP3Q9UFD9 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.15□□□□□ -2.07
RIMBP3Q9UFD9 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.15□□□□□ -2.07
RIMBP3Q9UFD9 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.15□□□□□ -2.07
RIMBP3Q9UFD9 AC016065.2-201ENST00000514530 444 ntBASIC2.15□□□□□ -2.07
RIMBP3Q9UFD9 RNU6-113P-201ENST00000516653 101 ntBASIC2.15□□□□□ -2.07
RIMBP3Q9UFD9 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.15□□□□□ -2.07
RIMBP3Q9UFD9 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.15□□□□□ -2.07
RIMBP3Q9UFD9 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.15□□□□□ -2.07
RIMBP3Q9UFD9 AL590095.2-201ENST00000604136 117 ntBASIC2.15□□□□□ -2.07
RIMBP3Q9UFD9 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.15□□□□□ -2.07
RIMBP3Q9UFD9 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.15□□□□□ -2.07
RIMBP3Q9UFD9 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
RIMBP3Q9UFD9 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
RIMBP3Q9UFD9 RNU6-1243P-201ENST00000364028 107 ntBASIC2.14□□□□□ -2.07
RIMBP3Q9UFD9 FO393413.1-201ENST00000402892 195 ntBASIC2.14□□□□□ -2.07
RIMBP3Q9UFD9 MIR1304-201ENST00000408243 91 ntBASIC2.14□□□□□ -2.07
RIMBP3Q9UFD9 CYCSP48-201ENST00000417124 323 ntBASIC2.14□□□□□ -2.07
RIMBP3Q9UFD9 FO393419.3-201ENST00000428741 282 ntBASIC2.14□□□□□ -2.07
RIMBP3Q9UFD9 RABEPKP1-201ENST00000440529 1026 ntBASIC2.14□□□□□ -2.07
RIMBP3Q9UFD9 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.14□□□□□ -2.07
RIMBP3Q9UFD9 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.14□□□□□ -2.07
RIMBP3Q9UFD9 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.14□□□□□ -2.07
RIMBP3Q9UFD9 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.14□□□□□ -2.07
RIMBP3Q9UFD9 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.14□□□□□ -2.07
RIMBP3Q9UFD9 RPS29P20-201ENST00000489592 171 ntBASIC2.14□□□□□ -2.07
RIMBP3Q9UFD9 AC025459.1-201ENST00000504072 156 ntBASIC2.14□□□□□ -2.07
RIMBP3Q9UFD9 AC004062.1-201ENST00000509926 645 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms